RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TMEM5Q9Y2B1 443 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 C2CD2Q9Y426 696 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 DTNAQ9Y4J8 743 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PAXBP1Q9Y5B6 917 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 MMP24Q9Y5R2 645 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 KAT6BQ8WYB5 2073 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 LOC102723971A0A1B0GUV8 181 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 hCG_1807616A0A1W2PRN6 198 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ERI2A8K979 691 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 H0YC42 278 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 DDX39AO00148 427 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PSMA7O14818 248 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 HNRNPDLO14979 420 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 NPC1O15118 1278 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ZBTB43O43298 467 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TXNL1O43396 289 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ZBTB14O43829 449 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SOCS5O75159 536 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PTP4A3O75365 173 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 E2F6O75461 281 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ERAL1O75616 437 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 RASSF9O75901 435 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TSPAN9O75954 239 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF432O94892 652 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 NDUFB8O95169 186 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 EPN2O95208 641 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 OPN1MWP04001 364 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 OPN1MW2P0DN77 364 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 OPN1MW3P0DN78 364 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ACADMP11310 421 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PCP11498 1178 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 HARSP12081 509 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 GAP43P17677 238 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TFEBP19484 476 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PAX7P23759 505 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 EEF1GP26641 437 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 MAPK3P27361 379 aaPredicted RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 MLH1P40692 756 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PSMC4P43686 418 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 MXI1P50539 228 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TKTL1P51854 596 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PGDP52209 483 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 UBE3AQ05086 875 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 DAG1Q14118 895 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 KEAP1Q14145 624 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 EIF4A2Q14240 407 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SMAD1Q15797 465 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TSTQ16762 297 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ST3GAL2Q16842 350 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 MRGPRG-AS1Q2M3A8 158 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SHROOM1Q2M3G4 852 aaPredicted RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SLC35G1Q2M3R5 365 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 C1orf141Q5JVX7 400 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 CACHD1Q5VU97 1274 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TANGO2Q6ICL3 276 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ACAD10Q6JQN1 1059 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 IYDQ6PHW0 289 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PLEKHM3Q6ZWE6 761 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TMTC3Q6ZXV5 915 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SLFN11Q7Z7L1 901 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 MOGAT3Q86VF5 341 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 C2CD5Q86YS7 1000 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SPATA2LQ8IUW3 424 aaPredicted RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 HERC6Q8IVU3 1022 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SPEM1Q8N4L4 309 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TMEM199Q8N511 208 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 CCDC33Q8N5R6 958 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TMCO5AQ8N6Q1 288 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 CELF5Q8N6W0 485 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 RNF152Q8N8N0 203 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PNPLA1Q8N8W4 532 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SLC44A5Q8NCS7 719 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 DENND6BQ8NEG7 585 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 IPMKQ8NFU5 416 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 OR52K2Q8NGK3 314 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 CTCFLQ8NI51 663 aaPredicted RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 KIAA1524Q8TCG1 905 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ZFAND2BQ8WV99 257 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ANKRD49Q8WVL7 239 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PIGKQ92643 395 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 USP6NLQ92738 828 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ZUFSPQ96AP4 578 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 EDC3Q96F86 508 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 CFAP36Q96G28 342 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 KAZALD1Q96I82 304 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SUCLG2Q96I99 432 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 MRGPRX1Q96LB2 322 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 C16orf45Q96MC5 204 aaPredicted RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 DDX23Q9BUQ8 820 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 CINPQ9BW66 212 aaPredicted RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SCNM1Q9BWG6 230 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 TEX13BQ9BXU2 312 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 DNAI2Q9GZS0 605 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 PAIP1Q9H074 479 aaKnown RBP2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ZCWPW1Q9H0M4 648 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 RABEP2Q9H5N1 569 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 EPS8L2Q9H6S3 715 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 SYNCQ9H7C4 482 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 ACAD9Q9H845 621 aa2.35□□□□□ -2.03
PTPN12-212ENST00000494248 VPS37BQ9H9H4 285 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms