RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NEK10Q6ZWH5 1172 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 CAMKK1Q8N5S9 505 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 RDH11Q8TC12 318 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ZMYM5Q9UJ78 669 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 PTCH2Q9Y6C5 1203 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 DDX3YO15523 660 aaKnown RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 TLX1P31314 330 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 IL27RAQ6UWB1 636 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 C19orf18Q8NEA5 215 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 BSNDQ8WZ55 320 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ALG9Q9H6U8 611 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 SLIT3O75094 1523 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 WBP4O75554 376 aaKnown RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 NFKB1P19838 968 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 CES1P23141 567 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 RPL3P39023 403 aaKnown RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ST13P50502 369 aaKnown RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 TSNQ15631 228 aaKnown RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 NEDD8Q15843 81 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 C16orf62Q7Z3J2 963 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 HDDC2Q7Z4H3 204 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 EPHX4Q8IUS5 362 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ST13P5Q8NFI4 369 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 IL31RAQ8NI17 732 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 PWWP2AQ96N64 755 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 MLPHQ9BV36 600 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 NDOR1Q9UHB4 597 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 CENPXA8MT69 81 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 EPN2O95208 641 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 ABCG1P45844 678 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 GABRB2P47870 512 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 CHN2P52757 468 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 TRAPPC5Q8IUR0 188 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 POMGNT2Q8NAT1 580 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 PDGFDQ9GZP0 370 aaPredicted RBP19.34■□□□□ 0.69
COL27A1-207ENST00000494090 ASAH2Q9NR71 780 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 MSRAQ9UJ68 235 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SNX6Q9UNH7 406 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 RGSL1A5PLK6 1076 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 INAQ16352 499 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 KIAA0319LQ8IZA0 1049 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SERHL2Q9H4I8 314 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SERHLQ9NQF3 203 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 ATXN2Q99700 1313 aaKnown RBP19.34■□□□□ 0.69
COL27A1-207ENST00000494090 TBC1D3BA6NDS4 549 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 PLSCR1O15162 318 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 CTSEP14091 401 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 GRIA4P48058 902 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 TCEA2Q15560 299 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 HGSNATQ68CP4 663 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 CLYBLQ8N0X4 340 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 ZFP28Q8NHY6 868 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 PAIP1Q9H074 479 aaKnown RBP19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SLITRK2Q9H156 845 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 DDX18Q9NVP1 670 aaKnown RBP19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SMIM31A0A1B0GVY4 71 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 CCDC166P0CW27 439 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 STXBP5Q5T5C0 1151 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 MACC1Q6ZN28 852 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 OR8H2Q8N162 312 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SH3GL2Q99962 352 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 EPB41L4BQ9H329 900 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 SEMA4BQ9NPR2 832 aaPredicted RBP19.34■□□□□ 0.69
COL27A1-207ENST00000494090 RAP2CQ9Y3L5 183 aa19.34■□□□□ 0.69
COL27A1-207ENST00000494090 RECQL5O94762 991 aaPredicted RBP19.33■□□□□ 0.69
COL27A1-207ENST00000494090 PARNO95453 639 aaKnown RBP19.33■□□□□ 0.69
COL27A1-207ENST00000494090 ITGA2BP08514 1039 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 SNRPB2P08579 225 aaKnown RBP19.33■□□□□ 0.69
COL27A1-207ENST00000494090 PAX7P23759 505 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 PPM1AP35813 382 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 EPS8Q12929 822 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 AFTPHQ6ULP2 937 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 PIGZQ86VD9 579 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 MOSPD2Q8NHP6 518 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 RP9Q8TA86 221 aaKnown RBP19.33■□□□□ 0.69
COL27A1-207ENST00000494090 ZYG11BQ9C0D3 744 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 ZDHHC6Q9H6R6 413 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 ATP13A3Q9H7F0 1226 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 C1orf232A0A0U1RR37 186 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 EDF1O60869 148 aaKnown RBP19.33■□□□□ 0.69
COL27A1-207ENST00000494090 SMIM10L2AP0DMW4 78 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 SMIM10L2BP0DMW5 78 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 MYL12AP19105 171 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 TTPAP49638 278 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 SPIDRQ14159 915 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 NOMO2Q5JPE7 1267 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 ZCCHC7Q8N3Z6 543 aaKnown RBP19.33■□□□□ 0.69
COL27A1-207ENST00000494090 RNPEPQ9H4A4 650 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 POLR1DQ9Y2S0 133 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.69
COL27A1-207ENST00000494090 CCNB1P14635 433 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 FEN1P39748 380 aaKnown RBP19.33■□□□□ 0.68
COL27A1-207ENST00000494090 FKBP1BP68106 108 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 BEX3Q00994 111 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 IRF8Q02556 426 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 PFKFB4Q16877 469 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 ZC3H12AQ5D1E8 599 aaKnown RBP19.33■□□□□ 0.68
COL27A1-207ENST00000494090 C16orf59Q7L2K0 433 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms