RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TTC7BQ86TV6 843 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 GATAD2AQ86YP4 633 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 EID2Q8N6I1 236 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 BAHD1Q8TBE0 780 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 SAP25Q8TEE9 199 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 GATA6Q92908 595 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ARRDC3Q96B67 414 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 SLC17A9Q9BYT1 436 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 TTYH3Q9C0H2 523 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 HAUS4Q9H6D7 363 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 CCDC86Q9H6F5 360 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 WASF2Q9Y6W5 498 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 C16orf96A6NNT2 1141 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 EEF2KO00418 725 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 FTLP02792 175 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 METAP1P53582 386 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 RPL7AP62424 266 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 ILKQ13418 452 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 MAMLD1Q13495 774 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 TDRD12Q587J7 1177 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 KCNT1Q5JUK3 1230 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 ERMARDQ5T6L9 678 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 CCNI2Q6ZMN8 369 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 TMPRSS7Q7RTY8 843 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 SLCO6A1Q86UG4 719 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 LUZP1Q86V48 1076 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 TMPRSS12Q86WS5 348 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 PSTKQ8IV42 348 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 UMODL1-AS1Q8N2C9 162 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 IFT43Q96FT9 208 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 KLHL11Q9NVR0 708 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 UBA2Q9UBT2 640 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF212Q9UDV6 495 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 CNOT8Q9UFF9 292 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 AP4E1Q9UPM8 1137 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 BTBD3Q9Y2F9 522 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 DNAH14Q0VDD8 3507 aa16.83■□□□□ 0.28
PDLIM2-217ENST00000491330 WASH4PA8MWX3 477 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 RASA4BC9J798 803 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 FAM72CH0Y354 149 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 RIOK3O14730 519 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 RASA4O43374 803 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 RFPL3O75679 317 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 JUPP14923 745 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 PRLRP16471 622 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 RABIFP47224 123 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 NDST2P52849 883 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 TAS2R38P59533 333 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 DAB2P98082 770 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 ELP6Q0PNE2 266 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 PTK2BQ14289 1009 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 ACAP1Q15027 740 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF284Q2VY69 593 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 FAM72AQ5TYM5 149 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 FAM72DQ6L9T8 149 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 FAM72BQ86X60 149 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 CXorf40AQ8TE69 158 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 KLK6Q92876 244 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF653Q96CK0 615 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 NAP1L5Q96NT1 182 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 MYOCQ99972 504 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 SYT11Q9BT88 431 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 DHX35Q9H5Z1 703 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 ZWILCHQ9H900 591 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 CACNA1EQ15878 2313 aa16.82■□□□□ 0.28
PDLIM2-217ENST00000491330 ADAMTS9Q9P2N4 1935 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 TOR1BO14657 336 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PAK4O96013 591 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 UGT2B4P06133 528 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 CKMT2P17540 419 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 NFKBIAP25963 317 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PBX1P40424 430 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 ARL4AP40617 200 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 DUSP3P51452 185 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 THOP1P52888 689 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 HNRNPKP61978 463 aaKnown RBP eCLIP16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 E2F1Q01094 437 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 SERINC3Q13530 473 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 TRIM14Q14142 442 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 TSR1Q2NL82 804 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PPP1R15BQ5SWA1 713 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PLEKHA7Q6IQ23 1121 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 ERAP2Q6P179 960 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PTAR1Q7Z6K3 402 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 DNAAF5Q86Y56 855 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PYROXD2Q8N2H3 581 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 BBS5Q8N3I7 341 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 LZTR1Q8N653 840 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 PDCD7Q8N8D1 485 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 HCAR2Q8TDS4 363 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 FNIP1Q8TF40 1166 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 NSMCE1Q8WV22 266 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 ASB12Q8WXK4 309 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 KLHL32Q96NJ5 620 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 DUSP23Q9BVJ7 150 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 NDFIP2Q9NV92 336 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms