RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 UBASH3BQ8TF42 649 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 FIG4Q92562 907 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 ZNF347Q96SE7 839 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 NUAK2Q9H093 628 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 ST6GALNAC4Q9H4F1 302 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 VTA1Q9NP79 307 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 LIMD1Q9UGP4 676 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CNOT11Q9UKZ1 510 aaKnown RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 ERVK-11Q9UQG0 969 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 ILVBLA1L0T0 632 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM159BA6NKW6 160 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 DFFAO00273 331 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SNNO75324 88 aaPredicted RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 IL18RAPO95256 599 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 FKBP9O95302 570 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SMIM18P0DKX4 95 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 MLNP12872 115 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 MPP1Q00013 466 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 PRKCQQ04759 706 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 UBE3AQ05086 875 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CEACAM7Q14002 265 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 FGD3Q5JSP0 725 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SLC2A7Q6PXP3 512 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SPESP1Q6UW49 350 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 FKBP9P1Q75LS8 142 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CDH24Q86UP0 819 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 GATAD2AQ86YP4 633 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 BRSK2Q8IWQ3 736 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CENPLQ8N0S6 344 aaPredicted RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 DAW1Q8N136 415 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 PPP1R10Q96QC0 940 aaKnown RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 HERC2P3Q9BVR0 1158 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SENP6Q9GZR1 1112 aaPredicted RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 UBP1Q9NZI7 540 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 VPS51Q9UID3 782 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 KIAA1257Q9ULG3 409 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 LRP6O75581 1613 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 MT-ND1P03886 318 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 GPIP06744 558 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CYP2C8P10632 490 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 PCNAP12004 261 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 TUFMP49411 452 aaKnown RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CDKL1Q00532 357 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 BAATQ14032 418 aaPredicted RBP11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 KCNJ11Q14654 390 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 DEPDC1Q5TB30 811 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 TLK2Q86UE8 772 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SLC22A16Q86VW1 577 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SLC15A4Q8N697 577 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 ACER1Q8TDN7 264 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 LENG9Q96B70 501 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 PLEKHA5Q9HAU0 1116 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 MTRRQ9UBK8 725 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 OAZ3Q9UMX2 235 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 LOC100506127A0A0U1RQW1 187 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 BCLAF3A2AJT9 711 aaKnown RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 TMEM221A6NGB7 291 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CCDC154A6NI56 674 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 STX7O15400 261 aaKnown RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 MAFGO15525 162 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 HUS1O60921 280 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 HSMCR30P0CW71 290 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 NPY2RP49146 381 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 BMXP51813 675 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 PCLAFQ15004 111 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 STXBP2Q15833 593 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 EEPD1Q7L9B9 569 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 FLCNQ8NFG4 579 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 ZNF670Q9BS34 389 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 OSBPL10Q9BXB5 764 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 MKS1Q9NXB0 559 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 NUDT5Q9UKK9 219 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 SLC30A1Q9Y6M5 507 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CCDC88AQ3V6T2 1871 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM95CA0A1B0GW59 222 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 M0QX08 132 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 ZNF701M0R085 212 aaPredicted RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 UGT2B4P06133 528 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 THRBP10828 461 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 GSTM4Q03013 218 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CDH17Q12864 832 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 PITRM1Q5JRX3 1037 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 DENND5AQ6IQ26 1287 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CHSY3Q70JA7 882 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 ARMC8Q8IUR7 673 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 EFHD2Q96C19 240 aaPredicted RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 KIF12Q96FN5 646 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 NODALQ96S42 347 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 ERGIC3Q9Y282 383 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 NRXN3Q9Y4C0 1643 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 TK2O00142 265 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 TBX1O43435 398 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CLIC3O95833 236 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CFHP08603 1231 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 ALDH4A1P30038 563 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 TMBIM6P55061 237 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 MRPS5P82675 430 aaKnown RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 TMEM132DQ14C87 1099 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms