RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CACNB4O00305 520 aaPredicted RBP14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 PIRO00625 290 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 KRT6AP02538 564 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 KRT6BP04259 564 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 PCNAP12004 261 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 HOXA11P31270 313 aaPredicted RBP14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 KRT6CP48668 564 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 ILF2Q12905 390 aaKnown RBP14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 CRY1Q16526 586 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 LAYNQ6UX15 382 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 TMC3Q7Z5M5 1100 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 TMEM110Q86TL2 294 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 JADE3Q92613 823 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 CXorf40BQ96DE9 158 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 MYO19Q96H55 970 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 SLC4A5Q9BY07 1137 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 R3HDMLQ9H3Y0 253 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 ABCB8Q9NUT2 735 aa14.55□□□□□ -0.08
ARHGEF39-205ENST00000490638 FAM95CA0A1B0GW59 222 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 MBLAC1A4D2B0 266 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 EVPLLA8MZ36 301 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 AIM2O14862 343 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 PSMD8P48556 350 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 KCNK10P57789 538 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 PLIN5Q00G26 463 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 FAAP100Q0VG06 881 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 ITGA9Q13797 1035 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 GALNTL6Q49A17 601 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 ST13P5Q8NFI4 369 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 HERVK_113Q902F9 699 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 SAMD11Q96NU1 681 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 AJAP1Q9UKB5 411 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 EIF3LQ9Y262 564 aaKnown RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 RAI2Q9Y5P3 530 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 INPPL1O15357 1258 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 CD48P09326 243 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 SOX11P35716 441 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 MAPKAPK2P49137 400 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 GPR15P49685 360 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 CCNG1P51959 295 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 HNRNPH2P55795 449 aaKnown RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 SOX4Q06945 474 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 N4BP2L1Q5TBK1 243 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 CACHD1Q5VU97 1274 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 SUGP1Q8IWZ8 645 aaKnown RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 RTL3Q8N8U3 475 aaKnown RBP14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 CLIC5Q9NZA1 410 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 RNF103-CHMP3A0A140T963 221 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 MGAT4DA6NG13 374 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 KATNA1O75449 491 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 FAM153BP0C7A2 387 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 KELP23276 732 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 DGKAP23743 735 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 LSP1P33241 339 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 PHKG1Q16816 387 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 FAM153CQ494X1 144 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 C8orf48Q96LL4 319 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZFYVE1Q9HBF4 777 aa14.54□□□□□ -0.08
ARHGEF39-205ENST00000490638 C9IYK1 514 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 CDKN2BP42772 138 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 SEC13P55735 322 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 TGM3Q08188 693 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 TAF11Q15544 211 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 BCO2Q9BYV7 579 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 NDOR1Q9UHB4 597 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 GRK2P25098 689 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 NR6A1Q15406 480 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 UPP1Q16831 310 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 SH3PXD2AQ5TCZ1 1133 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 FAM151BQ6UXP7 276 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 SLC22A9Q8IVM8 553 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 CMTR2Q8IYT2 770 aaKnown RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 MAGEC3Q8TD91 643 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 BPIFB1Q8TDL5 484 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 MAGEB10Q96LZ2 347 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 MIOSQ9NXC5 875 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 KLHL2O95198 593 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 POP4O95707 220 aaKnown RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 NDST3O95803 873 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 MPOP05164 745 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 HAPLN1P10915 354 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 RFX3P48380 749 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 KCNQ1P51787 676 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 GHRHRQ02643 423 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 RNF19BQ6ZMZ0 732 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 C12orf76Q8N812 135 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 PSMG2Q969U7 264 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 SMOQ99835 787 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 PAAF1Q9BRP4 392 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 IL1RL2Q9HB29 575 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 CDK14O94921 469 aa14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 HNRNPDQ14103 355 aaKnown RBP14.53□□□□□ -0.08
ARHGEF39-205ENST00000490638 AFTPHQ6ULP2 937 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms