RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 HECAQ9UBI9 543 aaPredicted RBP17.7■□□□□ 0.42
ERCC3-207ENST00000490062 SARDHQ9UL12 918 aa17.7■□□□□ 0.42
ERCC3-207ENST00000490062 IGHV1OR15-9A0A0B4J2B8 117 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 PROB1E7EW31 1015 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 MUSKO15146 869 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 MAP3K6O95382 1288 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 ACADMP11310 421 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 CCNB1P14635 433 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 CES1P23141 567 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 DRD3P35462 400 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 MMP13P45452 471 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 AP1S1P61966 158 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 RAD51Q06609 339 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 ZNF569Q5MCW4 686 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 HEATR6Q6AI08 1181 aaKnown RBP17.69■□□□□ 0.42
ERCC3-207ENST00000490062 KIAA1324Q6UXG2 1013 aaKnown RBP17.69■□□□□ 0.42
ERCC3-207ENST00000490062 SLC36A4Q6YBV0 504 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 PGBD3Q8N328 593 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 PGBD5Q8N414 524 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 ACTL9Q8TC94 416 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 SPACA7Q96KW9 195 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 QKIQ96PU8 341 aaKnown RBP eCLIP17.69■□□□□ 0.42
ERCC3-207ENST00000490062 NUDCD1Q96RS6 583 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 FRMD8P1Q9BZ68 369 aaPredicted RBP17.69■□□□□ 0.42
ERCC3-207ENST00000490062 HAUS2Q9NVX0 235 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 WSB2Q9NYS7 404 aaPredicted RBP17.69■□□□□ 0.42
ERCC3-207ENST00000490062 SAE1Q9UBE0 346 aaPredicted RBP17.69■□□□□ 0.42
ERCC3-207ENST00000490062 DKK3Q9UBP4 350 aa17.69■□□□□ 0.42
ERCC3-207ENST00000490062 TSPAN11A1L157 253 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 CES2O00748 559 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 KCNK3O14649 394 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 MID1O15344 667 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 LEFTY1O75610 366 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 RPP40O75818 363 aaKnown RBP17.68■□□□□ 0.42
ERCC3-207ENST00000490062 IL1BP01584 269 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 ITGB7P26010 798 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 RGRP47804 291 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 ZNF235Q14590 738 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 SLC45A4Q5BKX6 768 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 SRLQ86TD4 932 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 SLC13A5Q86YT5 568 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-207ENST00000490062 AADATQ8N5Z0 425 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 CCNYQ8ND76 341 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 TFB1MQ8WVM0 346 aaKnown RBP17.68■□□□□ 0.42
ERCC3-207ENST00000490062 PPP1R16AQ96I34 528 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 ZNF641Q96N77 438 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-207ENST00000490062 VAT1Q99536 393 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 HDAC8Q9BY41 377 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 KDM4CQ9H3R0 1056 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 SGK2Q9HBY8 427 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 TTC7AQ9ULT0 858 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-207ENST00000490062 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 SPAG17Q6Q759 2223 aa17.68■□□□□ 0.42
ERCC3-207ENST00000490062 CD6P30203 668 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 PSMD8P48556 350 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 DNA2P51530 1060 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 OTUD4Q01804 1114 aaKnown RBP17.67■□□□□ 0.42
ERCC3-207ENST00000490062 CCDC15Q0P6D6 951 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 LLGL1Q15334 1064 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 SLC14A2Q15849 920 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 ZNF805Q5CZA5 627 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 ARSIQ5FYB1 569 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 ATXN7L2Q5T6C5 722 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-207ENST00000490062 RASGEF1CQ8N431 466 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 SLC35B2Q8TB61 432 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 ECHDC3Q96DC8 303 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 PBKQ96KB5 322 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
ERCC3-207ENST00000490062 FBXL12Q9NXK8 326 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 EVLQ9UI08 416 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-207ENST00000490062 MBD1Q9UIS9 605 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-207ENST00000490062 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
ERCC3-207ENST00000490062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-207ENST00000490062 A0A1W2PQ67 120 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 BCLAF3A2AJT9 711 aaKnown RBP17.66■□□□□ 0.42
ERCC3-207ENST00000490062 BNIP3LO60238 219 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 SOCS5O75159 536 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 PRLRP16471 622 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 SUOXP51687 545 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 AP1B1Q10567 949 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 TEX44Q53QW1 395 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 AGBL4Q5VU57 503 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 NCEH1Q6PIU2 408 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 CNTD1Q8N815 330 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 CADM4Q8NFZ8 388 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 MAIP1Q8WWC4 291 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 ATOH1Q92858 354 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-207ENST00000490062 DUSP15Q9H1R2 295 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-207ENST00000490062 ZDHHC6Q9H6R6 413 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 CD93Q9NPY3 652 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 RBM22Q9NW64 420 aaKnown RBP eCLIP17.66■□□□□ 0.42
ERCC3-207ENST00000490062 SERGEFQ9UGK8 458 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 TPX2Q9ULW0 747 aaKnown RBP17.66■□□□□ 0.42
ERCC3-207ENST00000490062 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
ERCC3-207ENST00000490062 A0A1W2PP55 124 aa17.65■□□□□ 0.42
ERCC3-207ENST00000490062 KCNK1O00180 336 aa17.65■□□□□ 0.42
ERCC3-207ENST00000490062 RNF103O00237 685 aa17.65■□□□□ 0.42
ERCC3-207ENST00000490062 KRIT1O00522 736 aa17.65■□□□□ 0.42
ERCC3-207ENST00000490062 TRAFD1O14545 582 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms