RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 HYOU1Q9Y4L1 999 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 hCG_1818297A0A087WSY0 165 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 A0A1W2PP55 124 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 BCLAF3A2AJT9 711 aaKnown RBP11.24□□□□□ -0.61
CPSF7-212ENST00000489728 PPP1R12AO14974 1030 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-212ENST00000489728 MATN3O15232 486 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 PLRG1O43660 514 aaKnown RBP11.24□□□□□ -0.61
CPSF7-212ENST00000489728 BNIP3LO60238 219 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 LEFTY1O75610 366 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 TGM2P21980 687 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 PEX5P50542 639 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 DNA2P51530 1060 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 CCR5P51681 352 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 NEK3P51956 506 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ADPRHP54922 357 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF235Q14590 738 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 PDK1Q15118 436 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 CYTH1Q15438 398 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF805Q5CZA5 627 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 WDR45BQ5MNZ6 344 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 AGBL4Q5VU57 503 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 NEK5Q6P3R8 708 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 MFSD7Q6UXD7 560 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 CACUL1Q86Y37 369 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 RFX6Q8HWS3 928 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 TEX26Q8N6G2 289 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 CHST14Q8NCH0 376 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 GANCQ8TET4 914 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 DNASE2BQ8WZ79 361 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 KRT35Q92764 455 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 RNF25Q96BH1 459 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ERLEC1Q96DZ1 483 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF641Q96N77 438 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-212ENST00000489728 OLFM3Q96PB7 478 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ALS2CR12Q96Q35 445 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 NEUROG2Q9H2A3 272 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 GOLPH3Q9H4A6 298 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ZDHHC6Q9H6R6 413 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 PREBQ9HCU5 417 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 CD93Q9NPY3 652 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 DKK3Q9UBP4 350 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 TRIM10Q9UDY6 481 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 SUSD2Q9UGT4 822 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 SARDHQ9UL12 918 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 INVSQ9Y283 1065 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 ACTL7AQ9Y615 435 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 THADAQ6YHU6 1953 aa11.24□□□□□ -0.61
CPSF7-212ENST00000489728 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 A0A1W2PQ67 120 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 METTL12A8MUP2 240 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 KPNA3O00505 521 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 KRIT1O00522 736 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 MTSS1O43312 755 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 AP1G1O43747 822 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 PTMAP06454 111 aaKnown RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 TNNT1P13805 278 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 CES1P23141 567 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ACSL1P33121 698 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 MPLP40238 635 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 MMP13P45452 471 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 MARCKSL1P49006 195 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 DHPSP49366 369 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 GBE1Q04446 702 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 PPIDQ08752 370 aaKnown RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 CSRP2Q16527 193 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 PLA2G2CQ5R387 149 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 MARC1Q5VT66 337 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ALG1LQ6GMV1 187 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 GDPD4Q6W3E5 623 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 LEKR1Q6ZMV7 388 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ARHGAP36Q6ZRI8 547 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 BBS12Q6ZW61 710 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ERN2Q76MJ5 926 aaKnown RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 SYT12Q8IV01 421 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 SLC41A1Q8IVJ1 513 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 CCDC50Q8IVM0 306 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 TMEFF1Q8IYR6 380 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 RYBPQ8N488 228 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 FRMD1Q8N878 549 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 TRIM58Q8NG06 486 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 CEP76Q8TAP6 659 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 GRIN3AQ8TCU5 1115 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 HES6Q96HZ4 224 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 HSPA12BQ96MM6 686 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 GPR174Q9BXC1 333 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ATP13A3Q9H7F0 1226 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 SERGEFQ9UGK8 458 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 EVLQ9UI08 416 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-212ENST00000489728 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 GUCA1BQ9UMX6 200 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 PPP2R2CQ9Y2T4 447 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms