RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 CHUKO15111 745 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ATP9BO43861 1147 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 PLIN3O60664 434 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 RAMP2O60895 175 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 NBNO60934 754 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SIN3BO75182 1162 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 PAPSS2O95340 614 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 LATS1O95835 1130 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 MOCS2O96007 188 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 EPOP01588 193 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 GALTP07902 379 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 OR4Q2P0C623 313 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ZDHHC11BP0C7U3 371 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 NQO1P15559 274 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 BGNP21810 368 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CES1P23141 567 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ATP5C1P36542 298 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SLC11A1P49279 550 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SLC11A2P49281 568 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 PAPOLAP51003 745 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 NCALDP61601 193 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CREMQ03060 361 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TAF10Q12962 218 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 THOC5Q13769 683 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 IKBKEQ14164 716 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 RFTN1Q14699 578 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 VEPH1Q14D04 833 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SNCBQ16143 134 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 DDR2Q16832 855 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TSNAXIP1Q2TAA8 658 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 MS4A13Q5J8X5 152 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 RABGAP1LQ5R372 815 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 C10orf120Q5SQS8 335 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TEDDM1Q5T9Z0 273 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SNX30Q5VWJ9 437 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 KIAA0930Q6ICG6 404 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SLC8B1Q6J4K2 584 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CYB5D1Q6P9G0 228 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ANKRD33Q7Z3H0 272 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 GALNT7Q86SF2 657 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CNTN4Q8IWV2 1026 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SUGP1Q8IWZ8 645 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ARHGAP24Q8N264 748 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CCDC33Q8N5R6 958 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TEX26Q8N6G2 289 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CNTD1Q8N815 330 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ZSCAN18Q8TBC5 510 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 STON2Q8WXE9 905 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ERP27Q96DN0 273 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CELF6Q96J87 481 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 RMDN2Q96LZ7 410 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TOX2Q96NM4 488 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 MLPHQ9BV36 600 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 CEP41Q9BYV8 373 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 LRMDAQ9H2I8 198 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 PRDM5Q9NQX1 630 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 ARHGEF3Q9NR81 526 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 RBM22Q9NW64 420 aaKnown RBP eCLIP6.72□□□□□ -1.331e-8■■■■□ 25.3
HDLBP-243ENST00000488923 OSER1Q9NX31 292 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 MARCH5Q9NX47 278 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 MTRRQ9UBK8 725 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 DNAJB4Q9UDY4 337 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 AFF4Q9UHB7 1163 aaKnown RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 LNPEPQ9UIQ6 1025 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 OGDHLQ9ULD0 1010 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 SLC12A8A0AV02 714 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 HMX2A2RU54 273 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 TBKBP1A7MCY6 615 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 TMEM114B3SHH9 223 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 F5H5T6 163 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 MSI1O43347 362 aaKnown RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 MGRN1O60291 552 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 TLR5O60602 858 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 UGT1A9O60656 530 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 LILRB3O75022 631 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 SNNO75324 88 aaPredicted RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 HAUS5O94927 633 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 ALDOAP04075 364 aaKnown RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 DLDP09622 509 aaKnown RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 ERVK-10P10266 1014 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 CPA3P15088 417 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 HLA-DPA1P20036 260 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 CALB2P22676 271 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 CRABP2P29373 138 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 HNRNPH1P31943 449 aaKnown RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 ADRA1AP35348 466 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 PBX3P40426 434 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 HARS2P49590 506 aaKnown RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 SERPINH1P50454 418 aaKnown RBP6.71□□□□□ -1.34
HDLBP-243ENST00000488923 MNAT1P51948 309 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 RABGGTBP53611 331 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 SLC12A2P55011 1212 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 ARPP19P56211 112 aa6.71□□□□□ -1.34
HDLBP-243ENST00000488923 CRADDP78560 199 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms