RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 NME5P56597 212 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 BTKQ06187 659 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 CSHL1Q14406 222 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 TMCO4Q5TGY1 634 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 PM20D1Q6GTS8 502 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 LAYNQ6UX15 382 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 GK5Q6ZS86 529 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ARHGAP12Q8IWW6 846 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 GTSE1Q9NYZ3 720 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 GIMAP2Q9UG22 337 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 RAD54BQ9Y620 910 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ERI2A8K979 691 aaKnown RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 H3BNX3 289 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 TAS2R39P59534 338 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 CDH17Q12864 832 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 FRG1Q14331 258 aaKnown RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 DENND5AQ6IQ26 1287 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ACTRT2Q8TDY3 377 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ZNF483Q8TF39 744 aaPredicted RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 GPR22Q99680 433 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 CDY1Q9Y6F8 540 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 COL4A4P53420 1690 aaPredicted RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 FAM95CA0A1B0GW59 222 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 GLTPD2A6NH11 291 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 J3KR12 359 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 TIMM44O43615 452 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 OR6B1O95007 311 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 PRSS56P0CW18 603 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 CTGFP29279 349 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 GRIA2P42262 883 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 NPY2RP49146 381 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 CSE1LP55060 971 aaKnown RBP12.83□□□□□ -0.35
CLIC4-202ENST00000488683 LBRQ14739 615 aaKnown RBP12.83□□□□□ -0.35
CLIC4-202ENST00000488683 INTS6LQ5JSJ4 861 aaKnown RBP12.83□□□□□ -0.35
CLIC4-202ENST00000488683 SH2D4BQ5SQS7 431 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 ARTNQ5T4W7 220 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 TMEM86AQ8N2M4 240 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 FBXW8Q8N3Y1 598 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 TTC9BQ8N6N2 239 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 TXNDC5Q8NBS9 432 aaKnown RBP12.83□□□□□ -0.35
CLIC4-202ENST00000488683 FAM110BQ8TC76 370 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 FCRL2Q96LA5 508 aaPredicted RBP12.83□□□□□ -0.35
CLIC4-202ENST00000488683 TSC22D3Q99576 134 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 TBL1YQ9BQ87 522 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 OSBPL2Q9H1P3 480 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 RBM22Q9NW64 420 aaKnown RBP eCLIP12.83□□□□□ -0.35
CLIC4-202ENST00000488683 CDH9Q9ULB4 789 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 PTGDR2Q9Y5Y4 395 aa12.83□□□□□ -0.35
CLIC4-202ENST00000488683 PTPRDP23468 1912 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 PGM3O95394 542 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 MYL4P12829 197 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 NELFEP18615 380 aaKnown RBP12.83□□□□□ -0.36
CLIC4-202ENST00000488683 GLDCP23378 1020 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 GRK4P32298 578 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
CLIC4-202ENST00000488683 UPP1Q16831 310 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 DDR2Q16832 855 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 PITRM1Q5JRX3 1037 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 LRRC8EQ6NSJ5 796 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 PIM3Q86V86 326 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 ATPAF2Q8N5M1 289 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 TRPV1Q8NER1 839 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 NAT14Q8WUY8 206 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 HEXDCQ8WVB3 486 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 CMTM5Q96DZ9 223 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 SMIM14Q96QK8 99 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 OLFM1Q99784 485 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 KIFC1Q9BW19 673 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 TRIM8Q9BZR9 551 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 ILKAPQ9H0C8 392 aaPredicted RBP12.83□□□□□ -0.36
CLIC4-202ENST00000488683 COPS7BQ9H9Q2 264 aaPredicted RBP12.83□□□□□ -0.36
CLIC4-202ENST00000488683 SLC38A7Q9NVC3 462 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 PTCH2Q9Y6C5 1203 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 NLRC5Q86WI3 1866 aa12.83□□□□□ -0.36
CLIC4-202ENST00000488683 A0A0U1RQS6 177 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 MATN2O00339 956 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 MAFKO60675 156 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CNTN5O94779 1100 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 SLC4A1P02730 911 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CRABP2P29373 138 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 GRIK1P39086 918 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 GRIK3Q13003 919 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 ANO4Q32M45 955 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 SEL1L3Q68CR1 1132 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CLEC6AQ6EIG7 209 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 DSELQ8IZU8 1212 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 GALNT4Q8N4A0 578 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 SLC39A3Q9BRY0 314 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 PCDHAC1Q9H158 963 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms