RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SLC12A4Q9UP95 1085 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 PSAT1Q9Y617 370 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 FAM237BA0A1B0GVD1 139 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 ILVBLA1L0T0 632 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 USP1O94782 785 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 CA3P07451 260 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 RHOCP08134 193 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 CDC25CP30307 473 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 WDR4P57081 412 aaKnown RBP20.5■□□□□ 0.87
NECAB3-213ENST00000488489 TTC39BQ5VTQ0 682 aaPredicted RBP20.5■□□□□ 0.87
NECAB3-213ENST00000488489 SETD3Q86TU7 594 aaPredicted RBP20.5■□□□□ 0.87
NECAB3-213ENST00000488489 DENND1AQ8TEH3 1009 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 TCEAL4Q96EI5 215 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 CERS2Q96G23 380 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 PPP1R2P1Q96PQ5 205 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 SMG9Q9H0W8 520 aaKnown RBP20.5■□□□□ 0.87
NECAB3-213ENST00000488489 MAN1C1Q9NR34 630 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 SOX13Q9UN79 622 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 MAGEB16A2A368 324 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 TRIM49D1C9J1S8 452 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 TBL1XO60907 577 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 EPCAMP16422 314 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 BMPR2Q13873 1038 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 POU6F1Q14863 301 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 PREPLQ4J6C6 727 aaPredicted RBP20.5■□□□□ 0.87
NECAB3-213ENST00000488489 TADA1Q96BN2 335 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 TACO1Q9BSH4 297 aaKnown RBP20.5■□□□□ 0.87
NECAB3-213ENST00000488489 KIFC1Q9BW19 673 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 CFAP97Q9P2B7 532 aa20.5■□□□□ 0.87
NECAB3-213ENST00000488489 MYLKQ15746 1914 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 MIA3Q5JRA6 1907 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 CCDC78A2IDD5 438 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 AP3B1O00203 1094 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 KDELR3O43731 214 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 C1RP00736 705 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 MT-ND3P03897 115 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 NMBRP28336 390 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 MARK2Q7KZI7 788 aaKnown RBP20.49■□□□□ 0.87
NECAB3-213ENST00000488489 FAM217AQ8IXS0 508 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.49■□□□□ 0.87
NECAB3-213ENST00000488489 GDAP1Q8TB36 358 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 SHKBP1Q8TBC3 707 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 BHMTQ93088 406 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 HTATIP2Q9BUP3 242 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 ACE2Q9BYF1 805 aaPredicted RBP20.49■□□□□ 0.87
NECAB3-213ENST00000488489 ATP13A1Q9HD20 1204 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 C5orf42Q9H799 3197 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 NOTCH4Q99466 2003 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 GBF1Q92538 1859 aa20.49■□□□□ 0.87
NECAB3-213ENST00000488489 TRAV19A0A0A6YYK7 116 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 MGRN1O60291 552 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 VIMP08670 466 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 SNRPAP09012 282 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 CA4P22748 312 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 SLC18A1P54219 525 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 WLSQ5T9L3 541 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 RNF219Q5W0B1 726 aaPredicted RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 BANPQ8N9N5 519 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 TMA16Q96EY4 203 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 ZNF599Q96NL3 588 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 SEMA3CQ99985 751 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 ELAC2Q9BQ52 826 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 VPS45Q9NRW7 570 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 NKIRAS1Q9NYS0 192 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 DNMT3BQ9UBC3 853 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 SMG5Q9UPR3 1016 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 PER2O15055 1255 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 CLASP2O75122 1294 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 KRT37O76014 449 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 OXCT1P55809 520 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 MGAT5Q09328 741 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 MROH9Q5TGP6 573 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 HTR3DQ70Z44 454 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 BBS7Q8IWZ6 715 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 CARNMT1Q8N4J0 409 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 WFDC5Q8TCV5 224 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 C12orf65Q9H3J6 166 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 SSU72Q9NP77 194 aaKnown RBP20.48■□□□□ 0.87
NECAB3-213ENST00000488489 CCL26Q9Y258 94 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 REV3LO60673 3130 aa20.48■□□□□ 0.87
NECAB3-213ENST00000488489 CBX4O00257 560 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 MOSPD3O75425 235 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 RB1P06400 928 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 PYGBP11216 843 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 EPHA5P54756 1037 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 ZNF235Q14590 738 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 SLC1A5Q15758 541 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 PCID2Q5JVF3 399 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 TRPM8Q7Z2W7 1104 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 SLC25A41Q8N5S1 370 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 DYDC1Q8WWB3 177 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 CDKL2Q92772 493 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 ATP2A3Q93084 1043 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 GCNAQ96QF7 691 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 AGAP2Q99490 1192 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 POLR1EQ9GZS1 481 aaKnown RBP20.47■□□□□ 0.87
NECAB3-213ENST00000488489 ARNT2Q9HBZ2 717 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 ZFATQ9P243 1243 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 RFPL1O75677 317 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 ASMTLO95671 621 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms