RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ATP5OP48047 213 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 ZBTB17Q13105 803 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 CST6Q15828 149 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 MYLK3Q32MK0 819 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
COL6A2-208ENST00000485591 ALG1LQ6GMV1 187 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 KIAA1324Q6UXG2 1013 aaKnown RBP20.2■□□□□ 0.82
COL6A2-208ENST00000485591 B4GALNT4Q76KP1 1039 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 LONP2Q86WA8 852 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 CACUL1Q86Y37 369 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 RYBPQ8N488 228 aaPredicted RBP20.2■□□□□ 0.82
COL6A2-208ENST00000485591 TMIEQ8NEW7 156 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 SLC35B2Q8TB61 432 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 PIP4K2CQ8TBX8 421 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 COG1Q8WTW3 980 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 VOPP1Q96AW1 172 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 FAM118BQ9BPY3 351 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 TPSD1Q9BZJ3 242 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 ZDHHC6Q9H6R6 413 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 NT5MQ9NPB1 228 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 RBM22Q9NW64 420 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL6A2-208ENST00000485591 SCML1Q9UN30 329 aa20.2■□□□□ 0.82
COL6A2-208ENST00000485591 KRIT1O00522 736 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 NEBLO76041 1014 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 DNTTP04053 509 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 HLA-DQB2P05538 268 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 C5AR1P21730 350 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 MAPK8P45983 427 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 PSMD8P48556 350 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 FNTBP49356 437 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 AP1S1P61966 158 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 RAD51Q06609 339 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 GRM3Q14832 879 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 SIX1Q15475 284 aaPredicted RBP20.19■□□□□ 0.82
COL6A2-208ENST00000485591 LONRF2Q1L5Z9 754 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 RALGPS1Q5JS13 557 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 FAM46CQ5VWP2 391 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 ADAT2Q7Z6V5 191 aaKnown RBP20.19■□□□□ 0.82
COL6A2-208ENST00000485591 OR6K2Q8NGY2 324 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 GRIN3AQ8TCU5 1115 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 HTR3CQ8WXA8 447 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 NUDCD1Q96RS6 583 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 POLR1EQ9GZS1 481 aaKnown RBP20.19■□□□□ 0.82
COL6A2-208ENST00000485591 PABPC3Q9H361 631 aaKnown RBP20.19■□□□□ 0.82
COL6A2-208ENST00000485591 USP36Q9P275 1121 aaKnown RBP20.19■□□□□ 0.82
COL6A2-208ENST00000485591 EVLQ9UI08 416 aaPredicted RBP20.19■□□□□ 0.82
COL6A2-208ENST00000485591 SARDHQ9UL12 918 aa20.19■□□□□ 0.82
COL6A2-208ENST00000485591 BCLAF3A2AJT9 711 aaKnown RBP20.18■□□□□ 0.82
COL6A2-208ENST00000485591 LEFTY1O75610 366 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 JCHAINP01591 159 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 ACADMP11310 421 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 PTPN3P26045 913 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 RBL1P28749 1068 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 SLC8A1P32418 973 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 WASHC5Q12768 1159 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 TTC31Q49AM3 519 aaPredicted RBP20.18■□□□□ 0.82
COL6A2-208ENST00000485591 ARSIQ5FYB1 569 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 DARS2Q6PI48 645 aaKnown RBP20.18■□□□□ 0.82
COL6A2-208ENST00000485591 SRLQ86TD4 932 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 CNTD1Q8N815 330 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 PRSS33Q8NF86 280 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 ACTRT1Q8TDG2 376 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 TUBGCP5Q96RT8 1024 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 VAT1Q99536 393 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 FERMT1Q9BQL6 677 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 OSBPL1AQ9BXW6 950 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 CPEB1Q9BZB8 566 aaKnown RBP20.18■□□□□ 0.82
COL6A2-208ENST00000485591 KCNH6Q9H252 994 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 ZSCAN32Q9NX65 697 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 SEPT10Q9P0V9 454 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 ATP8A1Q9Y2Q0 1164 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 SAR1BQ9Y6B6 198 aa20.18■□□□□ 0.82
COL6A2-208ENST00000485591 PGRMC1O00264 195 aaKnown RBP20.17■□□□□ 0.82
COL6A2-208ENST00000485591 MID1O15344 667 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 INSIG1O15503 277 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 LIASO43766 372 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 ZNF217O75362 1048 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 IGLV3-19P01714 112 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 GKP32189 559 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 SCNN1BP51168 640 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 MAXP61244 160 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 TEX44Q53QW1 395 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 SYT10Q6XYQ8 523 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 USP30Q70CQ3 517 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 ZBTB44Q8NCP5 570 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 ATG4AQ8WYN0 398 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 NKD2Q969F2 451 aaPredicted RBP20.17■□□□□ 0.82
COL6A2-208ENST00000485591 MS4A14Q96JA4 679 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 C16orf45Q96MC5 204 aaPredicted RBP20.17■□□□□ 0.82
COL6A2-208ENST00000485591 NAP1L3Q99457 506 aaPredicted RBP20.17■□□□□ 0.82
COL6A2-208ENST00000485591 CEP41Q9BYV8 373 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 SCUBE2Q9NQ36 999 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 ITM2CQ9NQX7 267 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 DNPEPQ9ULA0 475 aa20.17■□□□□ 0.82
COL6A2-208ENST00000485591 RNF103O00237 685 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 KPNA3O00505 521 aaPredicted RBP20.16■□□□□ 0.82
COL6A2-208ENST00000485591 ZNF185O15231 689 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 GJB3O75712 270 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 CES1P23141 567 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms