RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	HBP1	O60381	514 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	TSPAN9	O75954	239 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	SGPL1	O95470	568 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	EBLN1	P0CF75	366 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	UBL4A	P11441	157 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	GSTM2	P28161	218 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	BSG	P35613	385 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	MVD	P53602	400 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	EIF3B	P55884	814 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	WDR5	P61964	334 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	RAE1	P78406	368 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	TRIP6	Q15654	476 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	GXYLT1	Q4G148	440 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	ZNF766	Q5HY98	468 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	UBAP2	Q5T6F2	1119 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	PRAMEF17	Q5VTA0	474 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	ZNF280D	Q6N043	979 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	KIRREL2	Q6UWL6	708 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC29A4	Q7RTT9	530 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	CNGA4	Q8IV77	575 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	KCNJ9	Q92806	393 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	KIF1BP	Q96EK5	621 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	ZNF845	Q96IR2	970 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	RSRC1	Q96IZ7	334 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	LENG8	Q96PV6	779 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	THAP7	Q9BT49	309 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	LMAN2L	Q9H0V9	348 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	TTC12	Q9H892	705 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	HAUS2	Q9NVX0	235 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	KL	Q9UEF7	1012 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	GPR34	Q9UPC5	381 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	RCE1	Q9Y256	329 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	LYVE1	Q9Y5Y7	322 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	AGL	P35573	1532 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	SUPT6H	Q7KZ85	1726 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	UNC79	Q9P2D8	2635 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A8P	A6NJQ4	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A7P	A6NKC0	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A22P	A8MWA6	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A12P	A8MX19	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A23P	A8MXZ1	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024		H0YIZ8	118 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	SMAD6	O43541	496 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	STRN	O43815	780 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	KIF1C	O43896	1103 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	PRAMEF2	O60811	474 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	TMCC2	O75069	709 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	SEC14L2	O76054	403 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	GFPT2	O94808	682 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	OAZ2	O95190	189 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	MT-CO3	P00414	261 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	ENO1	P06733	434 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CHRM4	P08173	479 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A13P	P0C7W8	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM90A24P	P0C7X0	464 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	COX7A2	P14406	83 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	PKM	P14618	531 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	TGM2	P21980	687 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	SCP2	P22307	547 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	NDUFS1	P28331	727 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	EPHA8	P29322	1005 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	ABCD1	P33897	745 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	HOXD12	P35452	270 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	AGTR2	P50052	363 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CCT8	P50990	548 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	COPB1	P53618	953 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	RPL7A	P62424	266 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	GOLGA8DP	Q0D2H9	430 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	MFSD13A	Q14CX5	517 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	TOMM20	Q15388	145 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	MEA1	Q16626	185 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	KRT71	Q3SY84	523 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	GPATCH4	Q5T3I0	446 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CFAP58	Q5T655	872 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CEP85	Q6P2H3	762 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	GJB7	Q6PEY0	223 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	KYAT3	Q6YP21	454 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	C9orf47	Q6ZRZ4	202 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	H1FNT	Q75WM6	255 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	UEVLD	Q8IX04	471 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	LINC01465	Q8N7H1	131 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	TERB1	Q8NA31	727 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CLEC4C	Q8WTT0	213 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CNOT9	Q92600	299 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	ERP27	Q96DN0	273 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	DAZAP1	Q96EP5	407 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	RNFT2	Q96EX2	444 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	PRR11	Q96HE9	360 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CCDC17	Q96LX7	622 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	PHF7	Q9BWX1	381 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	RANBP17	Q9H2T7	1088 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	HIPK2	Q9H2X6	1198 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	MROH8	Q9H579	483 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC22A11	Q9NSA0	550 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	SEMA5B	Q9P283	1151 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	VPS28	Q9UK41	221 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	CAMK2A	Q9UQM7	478 aa		4.18	□□□□□ -1.74
VPS8-223	ENST00000485024	BIVM-ERCC5	R4GMW8	1640 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024		A6NCN8	305 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024		B4DLN1	442 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms