RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 NEK3P51956 506 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ATXN3P54252 364 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ADPRHP54922 357 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LMNB2Q03252 620 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LBRQ14739 615 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 GRM3Q14832 879 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MYLK3Q32MK0 819 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ATXN7L2Q5T6C5 722 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 AFMIDQ63HM1 303 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KIAA0895LQ68EN5 471 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NCBP2-AS2Q69YL0 99 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3GQ6DHY5 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3CQ6IPX1 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TCEAL6Q6IPX3 200 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TIGD7Q6NT04 549 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NCEH1Q6PIU2 408 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LRRC49Q8IUZ0 686 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TMEM139Q8IV31 216 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SLC41A1Q8IVJ1 513 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ARHGAP12Q8IWW6 846 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3Q8IZP1 549 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 OR2T34Q8NGX1 318 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CEP76Q8TAP6 659 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KIAA1524Q8TCG1 905 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RAPGEF5Q92565 580 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TCEAL3Q969E4 200 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZNF419Q96HQ0 510 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 EXOC2Q96KP1 924 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZNF599Q96NL3 588 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RNF157Q96PX1 679 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ETNK2Q9NVF9 386 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SERGEFQ9UGK8 458 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SEPT3Q9UH03 358 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 EVLQ9UI08 416 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SARDHQ9UL12 918 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TPX2Q9ULW0 747 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CFAP54Q96N23 3096 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RCCD1A6NED2 376 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 METTL12A8MUP2 240 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PRR5-ARHGAP8B1AHC4 643 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZNF487B1APH4 448 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PLK4O00444 970 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NEMP1O14524 444 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PJA2O43164 708 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KRT86O43790 486 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZRANB2O95218 330 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CD160O95971 181 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CCDC175P0C221 793 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZNF806P0C7X5 589 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ITGB7P26010 798 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 HSPA9P38646 679 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MAPK8P45983 427 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 DYNLT1P63172 113 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CNTN1Q12860 1018 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TFDP2Q14188 446 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PAFAH1B3Q15102 231 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 DUOXA1Q1HG43 343 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TRIM61Q5EBN2 209 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CCDC181Q5TID7 509 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PEAR1Q5VY43 1037 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ARHGAP36Q6ZRI8 547 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ADAT2Q7Z6V5 191 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 VSIG1Q86XK7 387 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CCNYQ8ND76 341 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KDM4CQ9H3R0 1056 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 C6orf106Q9H6K1 298 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 EIF2B4Q9UI10 523 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 REXO2Q9Y3B8 237 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 HEY1Q9Y5J3 304 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 WDR87Q6ZQQ6 2873 aa11.9□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NUMA1Q14980 2115 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 CCDC66A2RUB6 948 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 PATE3B3GLJ2 98 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 PLRG1O43660 514 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 ZNF821O75541 412 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 PCDH8O95206 1070 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 MAP3K6O95382 1288 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 UGT2B4P06133 528 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 IL4RP24394 825 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 MAOBP27338 520 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 SERPINA4P29622 427 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 GKP32189 559 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 DRD3P35462 400 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 MMP13P45452 471 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 METAP1P53582 386 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 ITKQ08881 620 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 CYTH1Q15438 398 aa11.89□□□□□ -0.51
CDK5RAP2-217ENST00000484546 TEAD4Q15561 434 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms