RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 KCNN4O15554 427 aa18.09■□□□□ 0.49
CPNE1-224ENST00000483359 LEFTY1O75610 366 aa18.09■□□□□ 0.49
CPNE1-224ENST00000483359 CHRNA3P32297 505 aa18.09■□□□□ 0.49
CPNE1-224ENST00000483359 MAMSTRQ6ZN01 415 aa18.09■□□□□ 0.49
CPNE1-224ENST00000483359 CDKL3Q8IVW4 592 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-224ENST00000483359 PRCCQ92733 491 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-224ENST00000483359 SIPA1Q96FS4 1042 aa18.09■□□□□ 0.49
CPNE1-224ENST00000483359 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
CPNE1-224ENST00000483359 RSPH9Q9H1X1 276 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF318Q5VUA4 2279 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 HACD1B0YJ81 288 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 F5H423 210 aaPredicted RBP18.08■□□□□ 0.49
CPNE1-224ENST00000483359 RNASEH1O60930 286 aaKnown RBP18.08■□□□□ 0.49
CPNE1-224ENST00000483359 PTPN3P26045 913 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 IFI35P80217 286 aaPredicted RBP18.08■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF33AQ06730 810 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.49
CPNE1-224ENST00000483359 ARSIQ5FYB1 569 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF776Q68DI1 518 aaPredicted RBP18.08■□□□□ 0.49
CPNE1-224ENST00000483359 CAMKK1Q8N5S9 505 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 TEX26Q8N6G2 289 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 SLC35B2Q8TB61 432 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 MGME1Q9BQP7 344 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 HEPHQ9BQS7 1158 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 WASF2Q9Y6W5 498 aa18.08■□□□□ 0.49
CPNE1-224ENST00000483359 KPNA3O00505 521 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-224ENST00000483359 MID1O15344 667 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 LIASO43766 372 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 PAPSS2O95340 614 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-224ENST00000483359 PIGNO95427 931 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 RPS14P62263 151 aaKnown RBP18.08■□□□□ 0.48
CPNE1-224ENST00000483359 WASHC5Q12768 1159 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 CST6Q15828 149 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 CNTD1Q8N815 330 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 PIP4K2CQ8TBX8 421 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 FATE1Q969F0 183 aa18.08■□□□□ 0.48
CPNE1-224ENST00000483359 POLR1EQ9GZS1 481 aaKnown RBP18.08■□□□□ 0.48
CPNE1-224ENST00000483359 KLHL8Q9P2G9 620 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-224ENST00000483359 PLK4O00444 970 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 CES2O00748 559 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 DNTTP04053 509 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 UGT2B4P06133 528 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 ACADMP11310 421 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 FNTBP49356 437 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 GDF10P55107 478 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 DSC2Q02487 901 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 BYSLQ13895 437 aaKnown RBP18.07■□□□□ 0.48
CPNE1-224ENST00000483359 MYLK3Q32MK0 819 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 DSG4Q86SJ6 1040 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 RASSF3Q86WH2 238 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 MAIP1Q8WWC4 291 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 RLN3Q8WXF3 142 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 IL12RB2Q99665 862 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 SEMA3CQ99985 751 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 FBRSQ9HAH7 460 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 SCUBE2Q9NQ36 999 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 PPM1HQ9ULR3 514 aa18.07■□□□□ 0.48
CPNE1-224ENST00000483359 GALR2O43603 387 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-224ENST00000483359 TDGF1P13385 188 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 PRLRP16471 622 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 TEX44Q53QW1 395 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 SRLQ86TD4 932 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 PRELID2Q8N945 189 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 FAM71DQ8N9W8 422 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 NSMCE3Q96MG7 304 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 NAP1L3Q99457 506 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-224ENST00000483359 TTC7AQ9ULT0 858 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-224ENST00000483359 ZNF148Q9UQR1 794 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 INVSQ9Y283 1065 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 BCLAF3A2AJT9 711 aaKnown RBP18.06■□□□□ 0.48
CPNE1-224ENST00000483359 C1QTNF3-AMACRE9PGA6 284 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 ALOX15BO15296 676 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 POP4O95707 220 aaKnown RBP18.06■□□□□ 0.48
CPNE1-224ENST00000483359 PRNPP04156 253 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 SLC8A1P32418 973 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
CPNE1-224ENST00000483359 RAD51Q06609 339 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 FAM124AQ86V42 546 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 CREG2Q8IUH2 290 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 ZNF567Q8N184 647 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 GANCQ8TET4 914 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 VOPP1Q96AW1 172 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 FERMT1Q9BQL6 677 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 NOD2Q9HC29 1040 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 SERGEFQ9UGK8 458 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 EBF1Q9UH73 591 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 CYP8B1Q9UNU6 501 aa18.06■□□□□ 0.48
CPNE1-224ENST00000483359 A0A1W2PP55 124 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 AXIN1O15169 862 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 MTSS1O43312 755 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 CR2P20023 1033 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 KCNJ1P48048 391 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 NSUN2Q08J23 767 aaKnown RBP eCLIP18.05■□□□□ 0.48
CPNE1-224ENST00000483359 OASLQ15646 514 aaKnown RBP18.05■□□□□ 0.48
CPNE1-224ENST00000483359 CCNG2Q16589 344 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 PID1Q7Z2X4 250 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 CAMK1DQ8IU85 385 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 PLPP6Q8IY26 295 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms