RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 RNMTO43148 476 aaKnown RBP3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 KRT36O76013 467 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 ACTL6BO94805 426 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 F7P08709 466 aaPredicted RBP3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 SERPINB3P29508 390 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 DPP6P42658 865 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 MXI1P50539 228 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 CDK7P50613 346 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 KRT72Q14CN4 511 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 ALFQ53S48 1182 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 TTC22Q5TAA0 569 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 CCDC174Q6PII3 467 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 TOGARAM2Q6ZUX3 1019 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 SLC44A2Q8IWA5 706 aaPredicted RBP3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 SPICE1Q8N0Z3 855 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 CPXCR1Q8N123 301 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 RFLNBQ8N5W9 214 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 MYRIPQ8NFW9 859 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 SPATA20Q8TB22 786 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 GPT2Q8TD30 523 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 SNRNP27Q8WVK2 155 aaKnown RBP3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 TMEM18Q96B42 140 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 ADGRG7Q96K78 797 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 HERPUD2Q9BSE4 406 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 PAGR1Q9BTK6 254 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 KATNAL1Q9BW62 490 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 NPFFR1Q9GZQ6 430 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 ABHD16BQ9H3Z7 469 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZHX3Q9H4I2 956 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 MALT1Q9UDY8 824 aa3.27□□□□□ -1.89
LAPTM4A-202ENST00000483117 FFAR2O15552 330 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 TCEA3O75764 348 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 AFPP02771 609 aaKnown RBP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 SP1P08047 785 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 MMP3P08254 477 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 ITGA2BP08514 1039 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 SETSIPP0DME0 302 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 CKMT1AP12532 417 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 CYP4B1P13584 511 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 DAOP14920 347 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 SERPINA4P29622 427 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 PPM1FP49593 454 aaPredicted RBP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 PNLIPRP1P54315 467 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 LMOD3Q0VAK6 560 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 ILF3Q12906 894 aaKnown RBP eCLIP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 MYBPHQ13203 477 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 PDCLQ13371 301 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 DCTN1Q14203 1278 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 EFHC1Q5JVL4 640 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 TBC1D9BQ66K14 1250 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 TYW3Q6IPR3 259 aaKnown RBP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF280DQ6N043 979 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 C1orf228Q6PIY5 440 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF771Q7L3S4 317 aaPredicted RBP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 RAB11FIP2Q7L804 512 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 GALNT7Q86SF2 657 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 SCAIQ8N9R8 606 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 TMEM255BQ8WV15 326 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 CPT1BQ92523 772 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 C3orf49Q96BT1 292 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 EID2BQ96D98 161 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 MAP3K20Q9NYL2 800 aaKnown RBP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 GTF2A1LQ9UNN4 478 aa3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 C19orf53Q9UNZ5 99 aaPredicted RBP3.26□□□□□ -1.89
LAPTM4A-202ENST00000483117 A0A1B0GVM2 712 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 DYTNA2CJ06 578 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 C17orf100A8MU93 164 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 BMPR1BO00238 502 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 HNRNPRO43390 633 aaKnown RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 CCNT1O60563 726 aaKnown RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 ACP5P13686 325 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 CHN1P15882 459 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 DDIT3P35638 169 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 AP2B1P63010 937 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 CHAF1AQ13111 956 aaPredicted RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 SNTA1Q13424 505 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 PFKFB4Q16877 469 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 AADACL2Q6P093 401 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 XRRA1Q6P2D8 792 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 RRAGAQ7L523 313 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 RASGRP2Q7LDG7 609 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 BRSK2Q8IWQ3 736 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 RBFAQ8N0V3 343 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF527Q8NB42 609 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 VPS37AQ8NEZ2 397 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 ATOH1Q92858 354 aaPredicted RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 TEFMQ96QE5 360 aaKnown RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 TMX4Q9H1E5 349 aaPredicted RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 PABPC3Q9H361 631 aaKnown RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 CLK4Q9HAZ1 481 aaKnown RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 ARFGAP3Q9NP61 516 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 PLCB1Q9NQ66 1216 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 PRDM8Q9NQV8 689 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 HERC5Q9UII4 1024 aaKnown RBP3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 KCND3Q9UK17 655 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 BAG5Q9UL15 447 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 RPS6KL1Q9Y6S9 549 aa3.25□□□□□ -1.89
LAPTM4A-202ENST00000483117 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 SAA2-SAA4A0A096LPE2 208 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 PRR23AA6NEV1 266 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms