RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PES1O00541 588 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 EPHB6O15197 1021 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 RHOBTB1O94844 696 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ATE1O95260 518 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 MOCS3O95396 460 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SERPING1P05155 500 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 DESP17661 470 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 HLA-FP30511 346 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 OXTRP30559 389 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 RDXP35241 583 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PCK1P35558 622 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 P2RY2P41231 377 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 HCAR3P49019 387 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 RGS7P49802 495 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 MRE11P49959 708 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF143P52747 638 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 UBASH3AP57075 661 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 IFRD2Q12894 506 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ANO4Q32M45 955 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 HNRNPA1L2Q32P51 320 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ARL13BQ3SXY8 428 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 DCAF6Q58WW2 860 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 C10orf76Q5T2E6 689 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 MANEALQ5VSG8 457 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 OTUD1Q5VV17 481 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SPECC1LQ69YQ0 1117 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 NADSYN1Q6IA69 706 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SLC36A4Q6YBV0 504 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 Q6ZS52 159 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 FAM183BPQ6ZVS7 135 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 USP30Q70CQ3 517 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 CACNA2D4Q7Z3S7 1137 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 TAC4Q86UU9 113 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 LRRC49Q8IUZ0 686 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 CCDC117Q8IWD4 279 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF683Q8IZ20 524 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PHACTR4Q8IZ21 702 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 DEFB106AQ8N104 65 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF513Q8N8E2 541 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 NIPA2Q8N8Q9 360 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 TSTD1Q8NFU3 115 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 RPLP0P6Q8NHW5 317 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SLC30A5Q8TAD4 765 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 CASKIN2Q8WXE0 1202 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 UBE2FQ969M7 185 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ALG14Q96F25 216 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 CCDC74BQ96LY2 380 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 NAP1L5Q96NT1 182 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 TBCBQ99426 244 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 CNPY3Q9BT09 278 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SPON2Q9BUD6 331 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 DUSP15Q9H1R2 295 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PDCL3Q9H2J4 239 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 WDCPQ9H6R7 721 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SYNCQ9H7C4 482 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 CARS2Q9HA77 564 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PRDM16Q9HAZ2 1276 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 MRPL47Q9HD33 250 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PARVAQ9NVD7 372 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 DNAJC17Q9NVM6 304 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 UBP1Q9NZI7 540 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ADAM22Q9P0K1 906 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 USP36Q9P275 1121 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SUN2Q9UH99 717 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 EVLQ9UI08 416 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 GGA2Q9UJY4 613 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 NAALADL1Q9UQQ1 740 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 HS3ST2Q9Y278 367 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 LUC7L2Q9Y383 392 aaKnown RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PCDHB14Q9Y5E9 798 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SCINQ9Y6U3 715 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ZFHX2Q9C0A1 2572 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-213ENST00000480102 GPR179Q6PRD1 2367 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ILVBLA1L0T0 632 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ZSCAN5CA6NGD5 496 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF487B1APH4 448 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 NEDD8-MDP1E9PL57 170 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 F5H5T6 163 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 M0QYT0 321 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SGK1O00141 431 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 MDM4O15151 490 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 FGF10O15520 208 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SLC7A4O43246 635 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 TEX33O43247 280 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 RTN2O75298 545 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 RPP40O75818 363 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 EPN2O95208 641 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SERPINC1P01008 464 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 MMEP08473 750 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF806P0C7X5 589 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 PABPC1P11940 636 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 KRT3P12035 628 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 TGM1P22735 817 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SDC4P31431 198 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 L1CAMP32004 1257 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ADRA1BP35368 520 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 FLT3P36888 993 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 USP8P40818 1118 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 MAPKAPK2P49137 400 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms