RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TXNDC5Q8NBS9 432 aaKnown RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 PTPRN2Q92932 1015 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 GABRG3Q99928 467 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 OSBPL6Q9BZF3 934 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 GBA3Q9H227 469 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 GLOD4Q9HC38 313 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 PAK5Q9P286 719 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 SUN2Q9UH99 717 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 LRRK1Q38SD2 2015 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 EML5Q05BV3 1969 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 TARSL2A2RTX5 802 aaKnown RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 TTI1O43156 1089 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 RPL22P35268 128 aaKnown RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 SCNN1BP51168 640 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 CCNHP51946 323 aaPredicted RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 DSC2Q02487 901 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 FZD5Q13467 585 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 PTK6Q13882 451 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 DPY19L3Q6ZPD9 716 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 Q6ZS52 159 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 SYDE1Q6ZW31 735 aaPredicted RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 MAATS1Q7Z4T9 603 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 SRLQ86TD4 932 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 JAMLQ86YT9 394 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 PLPP6Q8IY26 295 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 RYBPQ8N488 228 aaPredicted RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 NOA1Q8NC60 698 aaKnown RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 FLCNQ8NFG4 579 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 OR2A12Q8NGT7 310 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 NUDCD1Q96RS6 583 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 SEMA3CQ99985 751 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 SCUBE2Q9NQ36 999 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
VHL-203ENST00000477538 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
VHL-203ENST00000477538 CACNA1IQ9P0X4 2223 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 TTC24A2A3L6 582 aaPredicted RBP16.4■□□□□ 0.22
VHL-203ENST00000477538 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 F5H423 210 aaPredicted RBP16.4■□□□□ 0.22
VHL-203ENST00000477538 RAD51CO43502 376 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 ADAM23O75077 832 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 SIN3BO75182 1162 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 GJB3O75712 270 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 HOXB2P14652 356 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 CR2P20023 1033 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 PSMB4P28070 264 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 CSNK1DP48730 415 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 VPS41P49754 854 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 AP1S1P61966 158 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 NIPAL4Q0D2K0 466 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 RALGPS1Q5JS13 557 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 EOGTQ5NDL2 527 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 C9orf64Q5T6V5 341 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 C8orf74Q6P047 294 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 PKN3Q6P5Z2 889 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 C4orf22Q6V702 233 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 TAB3Q8N5C8 712 aaPredicted RBP16.4■□□□□ 0.22
VHL-203ENST00000477538 LRRN4CLQ8ND94 238 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 OR6K2Q8NGY2 324 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 ARRDC2Q8TBH0 407 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 IMP4Q96G21 291 aaKnown RBP16.4■□□□□ 0.22
VHL-203ENST00000477538 TRIM51Q9BSJ1 452 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 SLC25A51Q9H1U9 297 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 HECAQ9UBI9 543 aaPredicted RBP16.4■□□□□ 0.22
VHL-203ENST00000477538 EVLQ9UI08 416 aaPredicted RBP16.4■□□□□ 0.22
VHL-203ENST00000477538 MMP17Q9ULZ9 603 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 SIT1Q9Y3P8 196 aa16.4■□□□□ 0.22
VHL-203ENST00000477538 CEP192Q8TEP8 1941 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CHURC1-FNTBB4DL54 471 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 INSIG1O15503 277 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
VHL-203ENST00000477538 POP4O95707 220 aaKnown RBP16.39■□□□□ 0.21
VHL-203ENST00000477538 PDGFBP01127 241 aaPredicted RBP16.39■□□□□ 0.21
VHL-203ENST00000477538 CES1P23141 567 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CD86P42081 329 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 MAPK8P45983 427 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 MRPS25P82663 173 aaKnown RBP16.39■□□□□ 0.21
VHL-203ENST00000477538 RAD51Q06609 339 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 GPS1Q13098 491 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CAMK2GQ13555 558 aaPredicted RBP16.39■□□□□ 0.21
VHL-203ENST00000477538 STARD3Q14849 445 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 PARP6Q2NL67 630 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 MYLK3Q32MK0 819 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CWF19L1Q69YN2 538 aaKnown RBP16.39■□□□□ 0.21
VHL-203ENST00000477538 STK40Q8N2I9 435 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CHST14Q8NCH0 376 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CCHCR1Q8TD31 782 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 OR8D1Q8WZ84 308 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 CLDN23Q96B33 292 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 ERLEC1Q96DZ1 483 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 FCRL5Q96RD9 977 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 RBM15Q96T37 977 aaKnown RBP eCLIP16.39■□□□□ 0.21
VHL-203ENST00000477538 HEPHQ9BQS7 1158 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 ZDHHC6Q9H6R6 413 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 PRSS16Q9NQE7 514 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 ASIC3Q9UHC3 531 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 PLXND1Q9Y4D7 1925 aa16.39■□□□□ 0.21
VHL-203ENST00000477538 DOCK9Q9BZ29 2069 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms