RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 NPM3O75607 178 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 BPGMP07738 259 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SPATA31D3P0C874 917 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 PRSS56P0CW18 603 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 MTHFD1P11586 935 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 STMN1P16949 149 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CD52P31358 61 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TAF6P49848 677 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 THOP1P52888 689 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 HDAC4P56524 1084 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF235Q14590 738 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SURF1Q15526 300 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 KIAA1841Q6NSI8 718 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TAPT1Q6NXT6 567 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SPATA31D4Q6ZUB0 917 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FRA10AC1Q70Z53 315 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ARPINQ7Z6K5 226 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF567Q8N184 647 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CHST13Q8NET6 341 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FBXO30Q8TB52 745 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF483Q8TF39 744 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 NUDT8Q8WV74 236 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 VPS33AQ96AX1 596 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 RNF145Q96MT1 663 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 THUMPD3Q9BV44 507 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GATA5Q9BWX5 397 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 WDR35Q9P2L0 1181 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SRRDQ9UH36 339 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 DOCK5Q9H7D0 1870 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ALPK2Q86TB3 2170 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SPATA31C2B4DYI2 1134 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 H0Y626 953 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TRIM13O60858 407 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TRIM16O95361 564 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SERPINE1P05121 402 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 JUNP05412 331 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GSNP06396 782 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 MAP4P27816 1152 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FMO4P31512 558 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CD86P42081 329 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SLC7A2P52569 658 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GSCP56915 257 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ABCE1P61221 599 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 USP46P62068 366 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ESRRGP62508 458 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 IRX1P78414 480 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 IMPG1Q17R60 797 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 VPS26BQ4G0F5 336 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GDF6Q6KF10 455 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 RHBDF2Q6PJF5 856 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ADGRD1Q6QNK2 874 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FAM35AQ86V20 835 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CHSY1Q86X52 802 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 C7orf61Q8IZ16 206 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FAM47BQ8NA70 645 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 KYQ8NBH2 561 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 MAPK15Q8TD08 544 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CRYGNQ8WXF5 182 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 LRTOMTQ8WZ04 291 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FIG4Q92562 907 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 KCNA7Q96RP8 456 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GPR20Q99678 358 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TXLNGYQ9BZA5 131 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 HMX1Q9NP08 348 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 NCKIPSDQ9NZQ3 722 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CDH22Q9UJ99 828 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ACOT9Q9Y305 439 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FAM95CA0A1B0GW59 222 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 AP3B1O00203 1094 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GPR39O43194 453 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SNX2O60749 519 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GJB3O75712 270 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 LRATO95237 230 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CCL5P13501 91 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GP5P40197 560 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GPD2P43304 727 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 PIGFQ07326 219 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGAP1Q07960 439 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 FASTKQ14296 549 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CYP1B1Q16678 543 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 LSM12Q3MHD2 195 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ANKRD20A4Q4UJ75 823 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SH3D19Q5HYK7 790 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TBCELQ5QJ74 424 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GPR107Q5VW38 600 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 TRNP1Q6NT89 227 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 KLC3Q6P597 504 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 LPCAT2Q7L5N7 544 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SPPL2CQ8IUH8 684 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 AFAP1L2Q8N4X5 818 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SHCBP1Q8NEM2 672 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SLC35B2Q8TB61 432 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 PNPT1Q8TCS8 783 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 AUTS2Q8WXX7 1259 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF333Q96JL9 665 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 DHX33Q9H6R0 707 aaKnown RBP5.05□□□□□ -1.6
CCDC39-204ENST00000476379 SPC25Q9HBM1 224 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms