RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 MAML1Q92585 1016 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 COPS5Q92905 334 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PGLYRP2Q96PD5 576 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ERP44Q9BS26 406 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DNAJC11Q9NVH1 559 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PPARGC1AQ9UBK2 798 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 A0A1W2PPC1 479 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ILVBLA1L0T0 632 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 NEDD8-MDP1E9PL57 170 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 F8VP50 259 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TRIM16O95361 564 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 HIST1H2ABP04908 130 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CYBAP13498 195 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CORO1AP31146 461 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GDI1P31150 447 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GRIA2P42262 883 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 HCAR3P49019 387 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CARSP49589 748 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TXNL4AP83876 142 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 MEF2AQ02078 507 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CDK18Q07002 472 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TARBP2Q15633 366 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TRIP13Q15645 432 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 KIAA0408Q6ZU52 694 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 MOB2Q70IA6 237 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 HIST3H2AQ7L7L0 130 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 KSR1Q8IVT5 923 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SLC30A8Q8IWU4 369 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TAB3Q8N5C8 712 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 KIAA1958Q8N8K9 716 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF784Q8NCA9 323 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ZSWIM2Q8NEG5 633 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ELMO1Q92556 727 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 HIST1H2ACQ93077 130 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TRMOQ9BU70 441 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CCDC90BQ9GZT6 254 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 RACGAP1Q9H0H5 632 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 BCAS3Q9H6U6 928 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 RXFP1Q9HBX9 757 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GPAMQ9HCL2 828 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 EXD2Q9NVH0 621 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SPATA6Q9NWH7 488 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CHORDC1Q9UHD1 332 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PAPPAQ13219 1627 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 A0A1B0GW55 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 FOXN3O00409 490 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SPTLC1O15269 473 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 MEFVO15553 781 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 NDUFB5O43674 189 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 RNASEH2AO75792 299 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ACSL3O95573 720 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 AGR2O95994 175 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4L2P0CJ85 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4L3P0CJ86 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4L4P0CJ87 422 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4L5P0CJ88 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4L6P0CJ89 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4L7P0CJ90 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PKMP14618 531 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ITGB5P18084 799 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 RPL17P18621 184 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PMS1P54277 932 aaKnown RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TAF10Q12962 218 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SNTA1Q13424 505 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GRM2Q14416 872 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 MORN1Q5T089 497 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF618Q5T7W0 954 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 RAP1GAP2Q684P5 730 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 HIBCHQ6NVY1 386 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TPGS1Q6ZTW0 290 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CYP2U1Q7Z449 544 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PTAR1Q7Z6K3 402 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DNAJB7Q7Z6W7 309 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TAF8Q7Z7C8 310 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 RPAINQ86UA6 219 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ULK2Q8IYT8 1036 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 FBXO39Q8N4B4 442 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 AGR3Q8TD06 166 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SPATA17Q96L03 361 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PPP3R2Q96LZ3 170 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 AP1M1Q9BXS5 423 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 POLR1BQ9H9Y6 1135 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SGK2Q9HBY8 427 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GDF3Q9NR23 364 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GDAP2Q9NXN4 497 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DUX4Q9UBX2 424 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 TLR6Q9Y2C9 796 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 FIS1Q9Y3D6 152 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SPIN1Q9Y657 262 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GJB6O95452 261 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 NDST3O95803 873 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 IQCF3P0C7M6 154 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ACAT1P24752 427 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 WEE1P30291 646 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CSTF2P33240 577 aaKnown RBP eCLIP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 BUD31P41223 144 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 PDX1P52945 283 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 PPP2R2AP63151 447 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CACNG1Q06432 222 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms