RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TFDP2Q14188 446 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 LBRQ14739 615 aaKnown RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 PAFAH1B3Q15102 231 aaKnown RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 CCDC6Q16204 474 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 DUOXA1Q1HG43 343 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 ATXN7L2Q5T6C5 722 aaPredicted RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 KIAA0895LQ68EN5 471 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 NCBP2-AS2Q69YL0 99 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 ARHGAP36Q6ZRI8 547 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 ERN2Q76MJ5 926 aaKnown RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 SLC41A1Q8IVJ1 513 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 CCNYQ8ND76 341 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 OR6K2Q8NGY2 324 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 FAF2Q96CS3 445 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 NUSAP1Q9BXS6 441 aaKnown RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 GOLPH3Q9H4A6 298 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 C6orf106Q9H6K1 298 aaPredicted RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 PDFQ9HBH1 243 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 SERGEFQ9UGK8 458 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 EVLQ9UI08 416 aaPredicted RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 WASF2Q9Y6W5 498 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 MFSD11O43934 449 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 CFIP05156 583 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 UGT2B4P06133 528 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
USF1-205ENST00000473969 ITGB7P26010 798 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 DRD3P35462 400 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 HSPA9P38646 679 aaKnown RBP13.95□□□□□ -0.18
USF1-205ENST00000473969 MAPK8P45983 427 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 NEK3P51956 506 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 LMNB2Q03252 620 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 AASDHQ4L235 1098 aaPredicted RBP13.95□□□□□ -0.18
USF1-205ENST00000473969 ZNF805Q5CZA5 627 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 MARC1Q5VT66 337 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 GDPD4Q6W3E5 623 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
USF1-205ENST00000473969 PEX26Q7Z412 305 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 HDAC8Q9BY41 377 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 SALL4Q9UJQ4 1053 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 PILRBQ9UKJ0 227 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 AMFRQ9UKV5 643 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 ADGRG1Q9Y653 693 aa13.95□□□□□ -0.18
USF1-205ENST00000473969 ATXN2Q99700 1313 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 CCDC66A2RUB6 948 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PRR5-ARHGAP8B1AHC4 643 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PLK4O00444 970 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 NEMP1O14524 444 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 MAFKO60675 156 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PCDH8O95206 1070 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 CCDC175P0C221 793 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 CCNCP24863 283 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 MAOBP27338 520 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 GKP32189 559 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 CSNK1DP48730 415 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 SCNN1BP51168 640 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 METAP1P53582 386 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 ATXN3P54252 364 aaPredicted RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 ADPRHP54922 357 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 DYNLT1P63172 113 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 ITKQ08881 620 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 NSUN2Q08J23 767 aaKnown RBP eCLIP13.94□□□□□ -0.18
USF1-205ENST00000473969 GALNT2Q10471 571 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 TRIM61Q5EBN2 209 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 TFDP3Q5H9I0 405 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PLA2G2CQ5R387 149 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 KAZNQ674X7 775 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 MFSD7Q6UXD7 560 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PRR23CQ6ZRP0 262 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 SRLQ86TD4 932 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PRPF39Q86UA1 669 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 KATNAL2Q8IYT4 538 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 RNF10Q8N5U6 811 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 PQLC3Q8N755 202 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 UBL4BQ8N7F7 174 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 TSEN2Q8NCE0 465 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 EXD1Q8NHP7 514 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 DNASE2BQ8WZ79 361 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 ARRDC3Q96B67 414 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 KLHL32Q96NJ5 620 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 CPEB1Q9BZB8 566 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 ATP13A3Q9H7F0 1226 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PREBQ9HCU5 417 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 PARD6AQ9NPB6 346 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 LHX3Q9UBR4 397 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 EIF2B4Q9UI10 523 aaKnown RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.94□□□□□ -0.18
USF1-205ENST00000473969 PCDHA3Q9Y5H8 950 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 EML5Q05BV3 1969 aa13.94□□□□□ -0.18
USF1-205ENST00000473969 THADAQ6YHU6 1953 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 A0A1B0GTW7 788 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 C3orf70A6NLC5 250 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 291.4 ms