RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SHOX2O60902 331 aaPredicted RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 EPOP01588 193 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 INHBAP08476 426 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 CES1P23141 567 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 SLC12A1Q13621 1099 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 INO80DQ53TQ3 878 aaPredicted RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 CERCAMQ5T4B2 595 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 FYB2Q5VWT5 728 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 TRMT10BQ6PF06 316 aaKnown RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 POTEHQ6S545 545 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 TMEM184AQ6ZMB5 413 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 LEKR1Q6ZMV7 388 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 TRABD2AQ86V40 505 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 SLC26A11Q86WA9 606 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 LRRC6Q86X45 466 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 CYP4X1Q8N118 509 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS52-216ENST00000471309 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS52-216ENST00000471309 PPHLN1Q8NEY8 458 aaKnown RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 FIBINQ8TAL6 211 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 WFDC5Q8TCV5 224 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 MZB1Q8WU39 189 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 ING5Q8WYH8 240 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 CDKL2Q92772 493 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 ACDQ96AP0 544 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 ZNF669Q96BR6 464 aaPredicted RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 CERS2Q96G23 380 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 FEM1CQ96JP0 617 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 SEMA3CQ99985 751 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 KIFC1Q9BW19 673 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 MRM3Q9HC36 420 aaKnown RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 MARK1Q9P0L2 795 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 KIAA1522Q9P206 1035 aaPredicted RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 PRKAG3Q9UGI9 489 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 TBK1Q9UHD2 729 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 VPS51Q9UID3 782 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 IKBKGQ9Y6K9 419 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
VPS52-216ENST00000471309 MKI67P46013 3256 aaKnown RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 MYO18AQ92614 2054 aaKnown RBP9.51□□□□□ -0.89
VPS52-216ENST00000471309 IQANK1A0A1B0GTG1 560 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 ZCWPW2A0A1B0GU75 182 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 LOC285095A0A1B0GVY8 99 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 CXorf49A8MYA2 514 aaPredicted RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 ATP9BO43861 1147 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 SNAP91O60641 907 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 TMCC1O94876 653 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 GLP2RO95838 553 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 FGF1P05230 155 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 SERPINF2P08697 491 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 ATXN1LP0C7T5 689 aaKnown RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 KRT15P19012 456 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 CR2P20023 1033 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 HLA-DPA1P20036 260 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 PLK1P53350 603 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 MGAT5Q09328 741 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 IHHQ14623 411 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 CYTH1Q15438 398 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 TERF2Q15554 542 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 PCSK7Q16549 785 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 SKIDA1Q1XH10 827 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 ANKRD20A4Q4UJ75 823 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 RALGPS1Q5JS13 557 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 PCID2Q5JVF3 399 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 RETSATQ6NUM9 610 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 PKN3Q6P5Z2 889 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 TMC5Q6UXY8 1006 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 METTL3Q86U44 580 aaKnown RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 ARID3BQ8IVW6 561 aaPredicted RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 CTAGE3PQ8IX95 158 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 SRRM1Q8IYB3 904 aaKnown RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 TDHQ8IZJ6 230 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 CELF5Q8N6W0 485 aaKnown RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 C12orf76Q8N812 135 aaPredicted RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 PPM1NQ8N819 430 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 ITFG1Q8TB96 612 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 TIFAQ96CG3 184 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 LMLNQ96KR4 655 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 NUDCD1Q96RS6 583 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 RANBP9Q96S59 729 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 CAPS2Q9BXY5 557 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 NSUN3Q9H649 340 aaKnown RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 SSU72Q9NP77 194 aaKnown RBP9.5□□□□□ -0.89
VPS52-216ENST00000471309 SPHK2Q9NRA0 654 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 SMYD2Q9NRG4 433 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 LHX3Q9UBR4 397 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 TCAF1Q9Y4C2 921 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
VPS52-216ENST00000471309 HEATR9A2RTY3 570 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 INSIG1O15503 277 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 GJB3O75712 270 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 FAM155BO75949 473 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 KRT37O76014 449 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 CD160O95971 181 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 BRAFP15056 766 aa9.49□□□□□ -0.89
VPS52-216ENST00000471309 TPH1P17752 444 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms