RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 MBD1Q9UIS9 605 aaPredicted RBP12.13□□□□□ -0.47
VPS13D-204ENST00000469054 NCKAP1Q9Y2A7 1128 aa12.13□□□□□ -0.47
VPS13D-204ENST00000469054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS13D-204ENST00000469054 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 A0A1W2PP55 124 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 GOLGA6L9A6NEM1 432 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 APOC4-APOC2K7ER74 178 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 RNF103O00237 685 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 KRIT1O00522 736 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 MUSKO15146 869 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 RNASEH2AO75792 299 aaKnown RBP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 APOC2P02655 101 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 BCKDHBP21953 392 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 GKP32189 559 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 HSPA9P38646 679 aaKnown RBP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 MMP13P45452 471 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 CSNK1DP48730 415 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 ZNF235Q14590 738 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 POM121L1PQ3SYA9 428 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 PLK5Q496M5 336 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 CCDC181Q5TID7 509 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 PRR23BQ6ZRT6 265 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 AADATQ8N5Z0 425 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 TEX26Q8N6G2 289 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 GRIN3AQ8TCU5 1115 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 GANCQ8TET4 914 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 VOPP1Q96AW1 172 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 TOE1Q96GM8 510 aaKnown RBP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 OMDQ99983 421 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 HERPUD2Q9BSE4 406 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 CPEB1Q9BZB8 566 aaKnown RBP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 BTBD1Q9H0C5 482 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 NEUROG2Q9H2A3 272 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 ZDHHC6Q9H6R6 413 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 RBM22Q9NW64 420 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 SERGEFQ9UGK8 458 aa12.12□□□□□ -0.47
VPS13D-204ENST00000469054 EVLQ9UI08 416 aaPredicted RBP12.12□□□□□ -0.47
VPS13D-204ENST00000469054 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 PROB1E7EW31 1015 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 KPNA3O00505 521 aaPredicted RBP12.11□□□□□ -0.47
VPS13D-204ENST00000469054 INSIG1O15503 277 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 KIF5CO60282 957 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 CCNB1P14635 433 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 CR2P20023 1033 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 DRD3P35462 400 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 RGRP47804 291 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 SCNN1BP51168 640 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 METAP1P53582 386 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 RPL6Q02878 288 aaKnown RBP12.11□□□□□ -0.47
VPS13D-204ENST00000469054 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 AP1B1Q10567 949 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 GRM3Q14832 879 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 ZNF569Q5MCW4 686 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 SEL1L2Q5TEA6 688 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.11□□□□□ -0.47
VPS13D-204ENST00000469054 SRLQ86TD4 932 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 FAM124AQ86V42 546 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 PGBD5Q8N414 524 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 ACTL9Q8TC94 416 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 TFB1MQ8WVM0 346 aaKnown RBP12.11□□□□□ -0.47
VPS13D-204ENST00000469054 ARRDC3Q96B67 414 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 PPP1R16AQ96I34 528 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 ZC3H10Q96K80 434 aaKnown RBP12.11□□□□□ -0.47
VPS13D-204ENST00000469054 MGME1Q9BQP7 344 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 OSBPL1AQ9BXW6 950 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 CARD9Q9H257 536 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 SGK2Q9HBY8 427 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 FZD4Q9ULV1 537 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 JRKLQ9Y4A0 524 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 CKAP5Q14008 2032 aa12.11□□□□□ -0.47
VPS13D-204ENST00000469054 HACD1B0YJ81 288 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 KCNK1O00180 336 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 PLK4O00444 970 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 KCNK3O14649 394 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 NDUFS2O75306 463 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 NEBLO76041 1014 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 RHOBTB1O94844 696 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 JCHAINP01591 159 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 UGT2B4P06133 528 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 MSNP26038 577 aaKnown RBP12.1□□□□□ -0.47
VPS13D-204ENST00000469054 ACSL1P33121 698 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 MAPK8P45983 427 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 MAXP61244 160 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
VPS13D-204ENST00000469054 OTUD4Q01804 1114 aaKnown RBP12.1□□□□□ -0.47
VPS13D-204ENST00000469054 CNTN1Q12860 1018 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
VPS13D-204ENST00000469054 XRCC4Q13426 336 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 NOMO1Q15155 1222 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 ELF2Q15723 593 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
VPS13D-204ENST00000469054 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms