RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 MYO6Q9UM54 1294 aa4.45□□□□□ -1.7
SMC4-207ENST00000467263 PCDHA7Q9UN72 937 aa4.45□□□□□ -1.7
SMC4-207ENST00000467263 DGKBQ9Y6T7 804 aa4.45□□□□□ -1.7
SMC4-207ENST00000467263 FAM90A7PA6NKC0 464 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 SH2D7A6NKC9 451 aaPredicted RBP4.44□□□□□ -1.7
SMC4-207ENST00000467263 FAM90A22PA8MWA6 464 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 FAM90A12PA8MX19 464 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 FAM90A23PA8MXZ1 464 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 TPD52L2O43399 206 aaKnown RBP4.44□□□□□ -1.7
SMC4-207ENST00000467263 SERPINC1P01008 464 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 MLH1P40692 756 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 KCNJ4P48050 445 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 PCYT1AP49585 367 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 ARSFP54793 590 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 NAA25Q14CX7 972 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 FSCBQ5H9T9 825 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 ANKRD18AQ8IVF6 992 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 CPOQ8IVL8 374 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 MIGA1Q8NAN2 632 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 USP38Q8NB14 1042 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 OR4N2Q8NGD1 307 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 GCC1Q96CN9 775 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 LMLNQ96KR4 655 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 GFM1Q96RP9 751 aaKnown RBP4.44□□□□□ -1.7
SMC4-207ENST00000467263 TMEM204Q9BSN7 226 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMC4-207ENST00000467263 NPFFR1Q9GZQ6 430 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 ENTPD7Q9NQZ7 604 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 ALKBH4Q9NXW9 302 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 CNPY2Q9Y2B0 182 aa4.44□□□□□ -1.7
SMC4-207ENST00000467263 A0A096LPK6 155 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 EYA2O00167 538 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 KIF1CO43896 1103 aaKnown RBP4.43□□□□□ -1.7
SMC4-207ENST00000467263 CNTFP26441 200 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 HOXD3P31249 432 aaPredicted RBP4.43□□□□□ -1.7
SMC4-207ENST00000467263 PPM1FP49593 454 aaPredicted RBP4.43□□□□□ -1.7
SMC4-207ENST00000467263 CCR5P51681 352 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 UBE3AQ05086 875 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 TDGQ13569 410 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 TAF12Q16514 161 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 SLC4A8Q2Y0W8 1093 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 MAP3K21Q5TCX8 1036 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 ATG16L1Q676U5 607 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.43□□□□□ -1.7
SMC4-207ENST00000467263 CHD1LQ86WJ1 897 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 TMC8Q8IU68 726 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 ADAMTS14Q8WXS8 1223 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 CNOT9Q92600 299 aaKnown RBP4.43□□□□□ -1.7
SMC4-207ENST00000467263 NEUROG1Q92886 237 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 TMEM18Q96B42 140 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 PSMD1Q99460 953 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 MVB12BQ9H7P6 319 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 LUZP4Q9P127 313 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 CLDN16Q9Y5I7 305 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 RAI2Q9Y5P3 530 aa4.43□□□□□ -1.7
SMC4-207ENST00000467263 VWA5AO00534 786 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 PER2O15055 1255 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 CEP104O60308 925 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 TSPAN3O60637 253 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 CHRM4P08173 479 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 MMP3P08254 477 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 ACAA1P09110 424 aaPredicted RBP4.42□□□□□ -1.7
SMC4-207ENST00000467263 HOXC6P09630 235 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 TGFB3P10600 412 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 HSD3B1P14060 373 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 GNLYP22749 145 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 GPR12P47775 334 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 SLC18A2Q05940 514 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 Q0VFX4 171 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 TBL3Q12788 808 aaKnown RBP4.42□□□□□ -1.7
SMC4-207ENST00000467263 BIRC3Q13489 604 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 CAPSQ13938 189 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 ZNF324BQ6AW86 544 aaPredicted RBP4.42□□□□□ -1.7
SMC4-207ENST00000467263 FAM83HQ6ZRV2 1179 aaPredicted RBP4.42□□□□□ -1.7
SMC4-207ENST00000467263 BBS12Q6ZW61 710 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 MON1BQ7L1V2 547 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.42□□□□□ -1.7
SMC4-207ENST00000467263 LRRTM4Q86VH4 590 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 RBFAQ8N0V3 343 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 IQCF1Q8N6M8 205 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 GPT2Q8TD30 523 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 MORC4Q8TE76 937 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 RAB40AQ8WXH6 277 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 SH3KBP1Q96B97 665 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 UBXN10Q96LJ8 280 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 CD180Q99467 661 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 TAOK3Q9H2K8 898 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 EPHX3Q9H6B9 360 aa4.42□□□□□ -1.7
SMC4-207ENST00000467263 SRPRBQ9Y5M8 271 aaKnown RBP4.42□□□□□ -1.7
SMC4-207ENST00000467263 KDM4EB2RXH2 506 aaPredicted RBP4.41□□□□□ -1.7
SMC4-207ENST00000467263 POLBP06746 335 aa4.41□□□□□ -1.7
SMC4-207ENST00000467263 CTPS1P17812 591 aa4.41□□□□□ -1.7
SMC4-207ENST00000467263 CCT5P48643 541 aa4.41□□□□□ -1.7
SMC4-207ENST00000467263 CHRNDQ07001 517 aa4.41□□□□□ -1.7
SMC4-207ENST00000467263 CRYZQ08257 329 aaKnown RBP4.41□□□□□ -1.7
SMC4-207ENST00000467263 MYBPC2Q14324 1141 aa4.41□□□□□ -1.7
SMC4-207ENST00000467263 ZRSR2Q15696 482 aaKnown RBP4.41□□□□□ -1.7
SMC4-207ENST00000467263 EDRF1Q3B7T1 1238 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms