RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 IL36AQ9UHA7 158 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 PPM1HQ9ULR3 514 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 SCML1Q9UN30 329 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 EML5Q05BV3 1969 aa16.23■□□□□ 0.19
GPC1-207ENST00000466624 MUSKO15146 869 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 ZNF185O15231 689 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 NEBLO76041 1014 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 ADH1BP00325 375 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 JCHAINP01591 159 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 NDUFV2P19404 249 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 PTPN3P26045 913 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 RBL1P28749 1068 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 RGRP47804 291 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 WASHC5Q12768 1159 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
GPC1-207ENST00000466624 MYLK3Q32MK0 819 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 ZNF528Q3MIS6 628 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 FAM46CQ5VWP2 391 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 DARS2Q6PI48 645 aaKnown RBP16.22■□□□□ 0.19
GPC1-207ENST00000466624 ADAT2Q7Z6V5 191 aaKnown RBP16.22■□□□□ 0.19
GPC1-207ENST00000466624 SRLQ86TD4 932 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 CREG2Q8IUH2 290 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 PGBD5Q8N414 524 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
GPC1-207ENST00000466624 MDGA1Q8NFP4 955 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 TEKT5Q96M29 485 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 HHIPQ96QV1 700 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 NUDCD1Q96RS6 583 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 TUBGCP5Q96RT8 1024 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 FAM118BQ9BPY3 351 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 OSBPL1AQ9BXW6 950 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
GPC1-207ENST00000466624 NT5MQ9NPB1 228 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 TRHDEQ9UKU6 1024 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 DRG1Q9Y295 367 aaKnown RBP16.22■□□□□ 0.19
GPC1-207ENST00000466624 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
GPC1-207ENST00000466624 C1QTNF3-AMACRE9PGA6 284 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 GALR2O43603 387 aaPredicted RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 BNIP3LO60238 219 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 STK10O94804 968 aaKnown RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 HLA-DQB2P05538 268 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 ITGAVP06756 1048 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 STIP1P31948 543 aaKnown RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 NRLP54845 237 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 RPS14P62263 151 aaKnown RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 SFSWAPQ12872 951 aaKnown RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 CST6Q15828 149 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 CYP1B1Q16678 543 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 ATXN7L2Q5T6C5 722 aaPredicted RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 ANO7Q6IWH7 933 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 CNTD1Q8N815 330 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 PRELID2Q8N945 189 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 CHST14Q8NCH0 376 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 PIP4K2CQ8TBX8 421 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 HMGB4Q8WW32 186 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 C1orf54Q8WWF1 131 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 ATG4AQ8WYN0 398 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 PRCCQ92733 491 aaPredicted RBP16.21■□□□□ 0.19
GPC1-207ENST00000466624 NELL1Q92832 810 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 VOPP1Q96AW1 172 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 RTP4Q96DX8 246 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 EXOC2Q96KP1 924 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 PRRX2Q99811 253 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 USP29Q9HBJ7 922 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 SEPT10Q9P0V9 454 aa16.21■□□□□ 0.19
GPC1-207ENST00000466624 FANCMQ8IYD8 2048 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 GOLGA6L10A0A0M3HER8 536 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 C5orf60A6NFR6 353 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 RNF103O00237 685 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 KRIT1O00522 736 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 INSIG1O15503 277 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 KCNN4O15554 427 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 DNTTP04053 509 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 CTSLP07711 333 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 C5AR1P21730 350 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 PAFAH1B1P43034 410 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 SCNN1BP51168 640 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 SLC14A2Q15849 920 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 TTC31Q49AM3 519 aaPredicted RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 NCEH1Q6PIU2 408 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 B4GALNT4Q76KP1 1039 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 MMAAQ8IVH4 418 aaKnown RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 RYBPQ8N488 228 aaPredicted RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 HCAR2Q8TDS4 363 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 PPP1R16AQ96I34 528 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 ZNF641Q96N77 438 aaPredicted RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 ZDHHC6Q9H6R6 413 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 ATP13A3Q9H7F0 1226 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
GPC1-207ENST00000466624 BCCIPQ9P287 314 aaKnown RBP eCLIP16.2■□□□□ 0.18
GPC1-207ENST00000466624 EVLQ9UI08 416 aaPredicted RBP16.2■□□□□ 0.18
GPC1-207ENST00000466624 SOCS5O75159 536 aa16.19■□□□□ 0.18
GPC1-207ENST00000466624 ZNF217O75362 1048 aa16.19■□□□□ 0.18
GPC1-207ENST00000466624 LEFTY1O75610 366 aa16.19■□□□□ 0.18
GPC1-207ENST00000466624 IL1BP01584 269 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms