RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 YME1L1Q96TA2 773 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 HAUS2Q9NVX0 235 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 USH1CQ9Y6N9 552 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
VAPB-203ENST00000463370 A0A0G2JND7 137 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 CCL22O00626 93 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 NRG2O14511 850 aaPredicted RBP12.97□□□□□ -0.33
VAPB-203ENST00000463370 KLF11O14901 512 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 AURKAO14965 403 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 CSPG5O95196 566 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 RAG1P15918 1043 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 SLC11A2P49281 568 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 YBEYP58557 167 aaPredicted RBP12.97□□□□□ -0.33
VAPB-203ENST00000463370 GNA12Q03113 381 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 TNK2Q07912 1038 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 BNIP1Q12981 228 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 ZC3HC1Q86WB0 502 aaKnown RBP12.97□□□□□ -0.33
VAPB-203ENST00000463370 TNS4Q8IZW8 715 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 E2F7Q96AV8 911 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 ERP27Q96DN0 273 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 SEMA3CQ99985 751 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 KLF16Q9BXK1 252 aaPredicted RBP12.97□□□□□ -0.33
VAPB-203ENST00000463370 ARNT2Q9HBZ2 717 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 TRIM33Q9UPN9 1127 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 INSL5Q9Y5Q6 135 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
VAPB-203ENST00000463370 GLRA3O75311 464 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 PROCP04070 461 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 DLDP09622 509 aaKnown RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 ATXN1LP0C7T5 689 aaKnown RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 LAG3P18627 525 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 SAT1P21673 171 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 NCALDP61601 193 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 PCLAFQ15004 111 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 HSF5Q4G112 596 aaPredicted RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 FASTKD1Q53R41 847 aaKnown RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 FYB2Q5VWT5 728 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 KYAT3Q6YP21 454 aaKnown RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 NLRP9Q7RTR0 991 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 TRMT2BQ96GJ1 504 aaKnown RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 SPON2Q9BUD6 331 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 TRPC7Q9HCX4 862 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 HSFX1Q9UBD0 423 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 A0A096LPK6 155 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 LILRB3O75022 631 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 C2P06681 752 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 CA8P35219 290 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 SLC1A2P43004 574 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 RGRP47804 291 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 SERPINB8P50452 374 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 OCRLQ01968 901 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 ZNF460Q14592 562 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 MBLAC2Q68D91 279 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 TXNDC8Q6A555 127 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 RNF135Q8IUD6 432 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 TTC16Q8NEE8 873 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 NSMCE1Q8WV22 266 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 PLD4Q96BZ4 506 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 ARMC5Q96C12 935 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 ECT2Q9H8V3 914 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 MARCOQ9UEW3 520 aaPredicted RBP12.96□□□□□ -0.33
VAPB-203ENST00000463370 DCDC2Q9UHG0 476 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 KCTD3Q9Y597 815 aa12.96□□□□□ -0.33
VAPB-203ENST00000463370 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 KIAA0100Q14667 2235 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 ITM2AO43736 263 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 LYPLA1O75608 230 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 TROVE2P10155 538 aaKnown RBP eCLIP12.95□□□□□ -0.34
VAPB-203ENST00000463370 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 ARRB2P32121 409 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 AVPR1AP37288 418 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 SERPINH1P50454 418 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 CSRP3P50461 194 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 CSE1LP55060 971 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 CDH4P55283 916 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ACBD5Q5T8D3 534 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 CLEC14AQ86T13 490 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 C10orf107Q8IVU9 208 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 PRR11Q96HE9 360 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 EXOC2Q96KP1 924 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 PPP1R2P1Q96PQ5 205 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms