RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 IQCB1Q15051 598 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 SMAD1Q15797 465 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 ASIC2Q16515 512 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF805Q5CZA5 627 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 FIGNQ5HY92 759 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 SFMBT2Q5VUG0 894 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 PLEKHA7Q6IQ23 1121 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 KIAA1161Q6NSJ0 714 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 CAVIN1Q6NZI2 390 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 GATAD2AQ86YP4 633 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 UMODL1-AS1Q8N2C9 162 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 RTL3Q8N8U3 475 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM145Q8NBT3 493 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 OR2AP1Q8NGE2 309 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 ASB12Q8WXK4 309 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 KLK6Q92876 244 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 NAP1L5Q96NT1 182 aaPredicted RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 MCEEQ96PE7 176 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 LENG8Q96PV6 779 aaPredicted RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 EIF3CQ99613 913 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 EPAS1Q99814 870 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 SYT11Q9BT88 431 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 OSBPL1AQ9BXW6 950 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 SLC17A9Q9BYT1 436 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 KLHL11Q9NVR0 708 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 FTSJ1Q9UET6 329 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 ZFR2Q9UPR6 939 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 FCF1Q9Y324 198 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 MFHAS1Q9Y4C4 1052 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 FADS3Q9Y5Q0 445 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 LAMA5O15230 3695 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM191CA6NGB0 347 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 LRRC53A6NM62 1247 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 C16orf96A6NNT2 1141 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 RNF103O00237 685 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 KRIT1O00522 736 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ENC1O14682 589 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 CREB3O43889 395 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 RNF8O76064 485 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 PAK4O96013 591 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 SERPINC1P01008 464 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 FTLP02792 175 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 THEGLP0DJG4 465 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 EPHA8P29322 1005 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 SUOXP51687 545 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF135P52742 658 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 NDST2P52849 883 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TPM4P67936 248 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 KLHL30Q0D2K2 578 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 SGCGQ13326 291 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ILKQ13418 452 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 SERINC3Q13530 473 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ACAP1Q15027 740 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 PARP15Q460N3 678 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM259Q4ZIN3 620 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ERMARDQ5T6L9 678 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 KANSL1Q7Z3B3 1105 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF571Q7Z3V5 609 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TMC6Q7Z403 805 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ABI3BPQ7Z7G0 1075 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TTC7BQ86TV6 843 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TMPRSS12Q86WS5 348 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF354CQ86Y25 554 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 PSTKQ8IV42 348 aaKnown RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 PYROXD2Q8N2H3 581 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 RYBPQ8N488 228 aaPredicted RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 EID2Q8N6I1 236 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 GRIN3AQ8TCU5 1115 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 HCAR2Q8TDS4 363 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 FNIP1Q8TF40 1166 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TSC1Q92574 1164 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 CNDP2Q96KP4 475 aaKnown RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 BMFQ96LC9 184 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 FUCA2Q9BTY2 467 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 C1QTNF2Q9BXJ5 285 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 CPEB1Q9BZB8 566 aaKnown RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TM6SF2Q9BZW4 377 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TTYH3Q9C0H2 523 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 HAUS4Q9H6D7 363 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 NOL6Q9H6R4 1146 aaKnown RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 ZDHHC6Q9H6R6 413 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 MRPL47Q9HD33 250 aaKnown RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 TAS2R14Q9NYV8 317 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 NEU3Q9UQ49 428 aa7.4□□□□□ -1.22
PTPRF-210ENST00000463041 BZW2Q9Y6E2 419 aaKnown RBP7.4□□□□□ -1.22
PTPRF-210ENST00000463041 PKD1L2Q7Z442 2459 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 UNC13CQ8NB66 2214 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 RP1P56715 2156 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 LRRK1Q38SD2 2015 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 ANKRD36A6QL64 1941 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 NEMP2A6NFY4 417 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 IGLON5A6NGN9 336 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 SRRM3A6NNA2 597 aaPredicted RBP7.39□□□□□ -1.23
PTPRF-210ENST00000463041 TMCO5BA8MYB1 307 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 RASA4BC9J798 803 aa7.39□□□□□ -1.23
PTPRF-210ENST00000463041 DDX3XO00571 662 aaKnown RBP eCLIP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms