RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SLC9C1Q4G0N8 1177 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 KIAA1755Q5JYT7 1200 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 STRIP1Q5VSL9 837 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 ZKSCAN2Q63HK3 967 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 TTI2Q6NXR4 508 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 AAGABQ6PD74 315 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 KLHL35Q6PF15 583 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 NCEH1Q6PIU2 408 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 TSSK4Q6SA08 328 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 CYP20A1Q6UW02 462 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 C16orf54Q6UWD8 224 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 ENOSF1Q7L5Y1 443 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 KIAA2013Q8IYS2 634 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 FAM185AQ8N0U4 392 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 C17orf53Q8N3J3 647 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 TMEM116Q8NCL8 245 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 C1orf131Q8NDD1 294 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 CREB3L4Q8TEY5 395 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 ATOH1Q92858 354 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 MAP4K1Q92918 833 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 ARHGEF2Q92974 986 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 GTF3C6Q969F1 213 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 JAKMIP2Q96AA8 810 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 FAM120BQ96EK7 910 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 ZC3HAV1LQ96H79 300 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 NCAPGQ9BPX3 1015 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 GATA5Q9BWX5 397 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 FRMD8Q9BZ67 464 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 MOV10Q9HCE1 1003 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 ZNF304Q9HCX3 659 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 RRP7BPQ9NSQ0 103 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 SEMA4GQ9NTN9 838 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 ARPP21Q9UBL0 812 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 HSPB7Q9UBY9 170 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 UTS2RQ9UKP6 389 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 A4GNTQ9UNA3 340 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.35□□□□□ -1.87
VCL-203ENST00000461383 FAM96BQ9Y3D0 163 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 CLDN16Q9Y5I7 305 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 COL11A2P13942 1736 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 A0A096LPK6 155 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 FAM157AC9JC47 383 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 USP17L23D6RBM5 183 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 F8W810 466 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 TGFB1I1O43294 461 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 NEURL1O76050 574 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 SEC31AO94979 1220 aaKnown RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 MLYCDO95822 493 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 NHLRC4P0CG21 123 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 CSH1P0DML2 217 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 CSH2P0DML3 217 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 RARGP13631 454 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 PTPN2P17706 415 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 CDH2P19022 906 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 PTGER1P34995 402 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 RFC1P35251 1148 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 HADHAP40939 763 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 DPP6P42658 865 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 PTH2RP49190 550 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 INHBCP55103 352 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 GHRHRQ02643 423 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 CALD1Q05682 793 aaKnown RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 FHL2Q14192 279 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 PGM5Q15124 567 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 TTC39AQ5SRH9 613 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 ISM2Q6H9L7 571 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 SARM1Q6SZW1 724 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 Q6ZPA2 131 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 FAM57BQ71RH2 274 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 SZRD1Q7Z422 152 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 TBC1D26Q86UD7 250 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 TEX11Q8IYF3 940 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 ZCCHC9Q8N567 271 aaKnown RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 WDTC1Q8N5D0 677 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 CMASQ8NFW8 434 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 GPR150Q8NGU9 434 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 RASSF8Q8NHQ8 419 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 BCAS4Q8TDM0 211 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 KAT2AQ92830 837 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 NSUN4Q96CB9 384 aaKnown RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 CMTM3Q96MX0 182 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 SIN3AQ96ST3 1273 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 FAM118BQ9BPY3 351 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 CENPOQ9BU64 300 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 AAMDCQ9H7C9 122 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 FBRSL1Q9HCM7 1045 aaKnown RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 MLXIPLQ9NP71 852 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 ANKEF1Q9NU02 776 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 ZNHIT2Q9UHR6 403 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 HAO1Q9UJM8 370 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 RPS6KA6Q9UK32 745 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 ING1Q9UK53 422 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 PCDHGB4Q9UN71 923 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 LAMP3Q9UQV4 416 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 CARD8Q9Y2G2 431 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 RAP2CQ9Y3L5 183 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 RPS6KL1Q9Y6S9 549 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 AOX1Q06278 1338 aa3.34□□□□□ -1.87
VCL-203ENST00000461383 ZNF335Q9H4Z2 1342 aaPredicted RBP3.34□□□□□ -1.87
VCL-203ENST00000461383 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms