RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CSNK1DP48730 415 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 RPS14P62263 151 aaKnown RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 ZNF211Q13398 564 aaPredicted RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 TTC31Q49AM3 519 aaPredicted RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 HS1BP3Q53T59 392 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 DCAF12L1Q5VU92 463 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 KIAA1324Q6UXG2 1013 aaKnown RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 NPNTQ6UXI9 565 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 DPY19L3Q6ZPD9 716 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 CCDC13Q8IYE1 715 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 C12orf50Q8NA57 414 aaPredicted RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 PSKH2Q96QS6 385 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 TPSD1Q9BZJ3 242 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 ITM2CQ9NQX7 267 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 SEMA4GQ9NTN9 838 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 HECAQ9UBI9 543 aaPredicted RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 IL36AQ9UHA7 158 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 AMACRQ9UHK6 382 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 PPM1HQ9ULR3 514 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 KCNK3O14649 394 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 FOXD2O60548 495 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-209ENST00000460573 MAP3K6O95382 1288 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 CCNHP51946 323 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-209ENST00000460573 SLC10A7Q0GE19 358 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 XRCC4Q13426 336 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 ZNF235Q14590 738 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 GRM3Q14832 879 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 ELF2Q15723 593 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 CST6Q15828 149 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 C11orf74Q86VG3 221 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 MMAAQ8IVH4 418 aaKnown RBP22.8■■□□□ 1.24
C9orf3-209ENST00000460573 TEX26Q8N6G2 289 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 TTC13Q8NBP0 860 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 MAML1Q92585 1016 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 TM6SF2Q9BZW4 377 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 PARD6AQ9NPB6 346 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 LHX3Q9UBR4 397 aa22.8■■□□□ 1.24
C9orf3-209ENST00000460573 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.8■■□□□ 1.24
C9orf3-209ENST00000460573 HACD1B0YJ81 288 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 IL1BP01584 269 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 C5AR1P21730 350 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 OXTRP30559 389 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 MMP13P45452 471 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 MYLK3Q32MK0 819 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 AASDHQ4L235 1098 aaPredicted RBP22.79■■□□□ 1.24
C9orf3-209ENST00000460573 AADACL2Q6P093 401 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 USP30Q70CQ3 517 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 KBTBD6Q86V97 674 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 SLC35F6Q8N357 371 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 PIP4K2CQ8TBX8 421 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 SPACA7Q96KW9 195 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 LGMNQ99538 433 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 CPEB1Q9BZB8 566 aaKnown RBP22.79■■□□□ 1.24
C9orf3-209ENST00000460573 SLC6A17Q9H1V8 727 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 PABPC3Q9H361 631 aaKnown RBP22.79■■□□□ 1.24
C9orf3-209ENST00000460573 USP36Q9P275 1121 aaKnown RBP22.79■■□□□ 1.24
C9orf3-209ENST00000460573 ZNF292O60281 2723 aa22.79■■□□□ 1.24
C9orf3-209ENST00000460573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 MTSS1O43312 755 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 ZNF189O75820 626 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 IGLV3-19P01714 112 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 CCNB1P14635 433 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 PECAM1P16284 738 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 SLC8A1P32418 973 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 P2RY2P41231 377 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 MAPK8P45983 427 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 CCDC15Q0P6D6 951 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 AP1B1Q10567 949 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 NOMO1Q15155 1222 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 CSRP2Q16527 193 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 RALGPS1Q5JS13 557 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 PRR23CQ6ZRP0 262 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 RYBPQ8N488 228 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 TSEN2Q8NCE0 465 aaKnown RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 CHST14Q8NCH0 376 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 TFB1MQ8WVM0 346 aaKnown RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 PPP1R16AQ96I34 528 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 HERPUD2Q9BSE4 406 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 OSBPL1AQ9BXW6 950 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 ARRDC1-AS1Q9H2J1 176 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 SAE1Q9UBE0 346 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-209ENST00000460573 NCKAP1Q9Y2A7 1128 aa22.78■■□□□ 1.24
C9orf3-209ENST00000460573 SDK1Q7Z5N4 2213 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 NEBLO76041 1014 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 RHOBTB1O94844 696 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 CES1P23141 567 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 PSMD8P48556 350 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 TPMTP51580 245 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 IFI35P80217 286 aaPredicted RBP22.77■■□□□ 1.24
C9orf3-209ENST00000460573 KLF1Q13351 362 aaPredicted RBP22.77■■□□□ 1.24
C9orf3-209ENST00000460573 MAP7D1Q3KQU3 841 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 ATXN7L2Q5T6C5 722 aaPredicted RBP22.77■■□□□ 1.24
C9orf3-209ENST00000460573 NETO1Q8TDF5 533 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 TRIM44Q96DX7 344 aaPredicted RBP22.77■■□□□ 1.24
C9orf3-209ENST00000460573 LOXL4Q96JB6 756 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 TUBGCP5Q96RT8 1024 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 RTKNQ9BST9 563 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 ZDHHC6Q9H6R6 413 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 DLL3Q9NYJ7 618 aa22.77■■□□□ 1.24
C9orf3-209ENST00000460573 WASF2Q9Y6W5 498 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms