RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 BIN1O00499 593 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 FPGTO14772 594 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 KLK10O43240 276 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 TSPAN6O43657 245 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 CLCN1P35523 988 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 SULT1E1P49888 294 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 ARF5P84085 180 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 GNA12Q03113 381 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 DEUP1Q05D60 604 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 MAPK8IP2Q13387 824 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 CDKN3Q16667 212 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 CARD16Q5EG05 197 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 ARHGAP40Q5TG30 622 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 RBM44Q6ZP01 1051 aaKnown RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 ARCQ7LC44 396 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 EFL1Q7Z2Z2 1120 aaKnown RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 FAM71AQ8IYT1 594 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 TMEM35BQ8NCS4 154 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 WDR48Q8TAF3 677 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 BTN2A2Q8WVV5 523 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 NAT6Q93015 286 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 CCDC97Q96F63 343 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 PRR11Q96HE9 360 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 TBCBQ99426 244 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 BOCQ9BWV1 1114 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 ZYG11BQ9C0D3 744 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 RETREG1Q9H6L5 497 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 ATP13A1Q9HD20 1204 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 SIX2Q9NPC8 291 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 PPARGC1AQ9UBK2 798 aaKnown RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 RWDD2AQ9UIY3 292 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 AJAP1Q9UKB5 411 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 ENTPD2Q9Y5L3 495 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 SNX10Q9Y5X0 201 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 TDRD6O60522 2096 aaKnown RBP10.62□□□□□ -0.71
HDLBP-227ENST00000458564 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 DOCK4Q8N1I0 1966 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 K7ENP7 123 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 FOXN3O00409 490 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 SPINT1O43278 529 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 ENDOD1O94919 500 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 CD160O95971 181 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 C6P13671 934 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 JUNDP17535 347 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 FLT3P36888 993 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 ETFBP38117 255 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 ABL2P42684 1182 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 PDX1P52945 283 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 GEMIN4P57678 1058 aaKnown RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 BPIFB4P59827 614 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 NRG1Q02297 640 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 EIF2B5Q13144 721 aaKnown RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 SGCGQ13326 291 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 PDE1CQ14123 709 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 NR0B2Q15466 257 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 C3orf38Q5JPI3 329 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 TPRG1LQ5T0D9 272 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 FAM102AQ5T9C2 384 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 MANEALQ5VSG8 457 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 INO80CQ6PI98 192 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-227ENST00000458564 CLEC14AQ86T13 490 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 XYLT1Q86Y38 959 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 IRF2BP1Q8IU81 584 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 VOPP1Q96AW1 172 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 C18orf8Q96DM3 657 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 ARHGEF26Q96DR7 871 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 ATXN7L3BQ96GX2 97 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 IL12RB2Q99665 862 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 SPON2Q9BUD6 331 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 SEMA4CQ9C0C4 833 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 OSBPL2Q9H1P3 480 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 PLCB1Q9NQ66 1216 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 TMPRSS4Q9NRS4 437 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 SPASTQ9UBP0 616 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 PIEZO2Q9H5I5 2752 aa10.61□□□□□ -0.71
HDLBP-227ENST00000458564 AHCTF1Q8WYP5 2266 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 CPED1A4D0V7 1026 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 IGLON5A6NGN9 336 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 C16orf96A6NNT2 1141 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 B8ZZF3 427 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 LMO7DNF2Z398 122 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 TOR1BO14657 336 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 AREL1O15033 823 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 LSM8O95777 96 aaKnown RBP10.6□□□□□ -0.71
HDLBP-227ENST00000458564 GSRP00390 522 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 PNMA6AP0CW24 399 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-227ENST00000458564 RPIAP49247 311 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 RNASE9P60153 205 aaKnown RBP10.6□□□□□ -0.71
HDLBP-227ENST00000458564 YPEL5P62699 121 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 DEFB133Q30KQ1 61 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 ZNF805Q5CZA5 627 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 C6orf132Q5T0Z8 1188 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 TRNP1Q6NT89 227 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 SLC35F3Q8IY50 421 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 ARL14Q8N4G2 192 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 WDR36Q8NI36 951 aaKnown RBP10.6□□□□□ -0.71
HDLBP-227ENST00000458564 LMX1AQ8TE12 382 aa10.6□□□□□ -0.71
HDLBP-227ENST00000458564 ARHGEF2Q92974 986 aaKnown RBP10.6□□□□□ -0.71
HDLBP-227ENST00000458564 GLMNQ92990 594 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms