RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CD86P42081 329 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 MMP13P45452 471 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 SLCO1A2P46721 670 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 GYS2P54840 703 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CAV1Q03135 178 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 ZNF33AQ06730 810 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CBLBQ13191 982 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 DHCR24Q15392 516 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 PCSK7Q16549 785 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 GEN1Q17RS7 908 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 PLEKHG6Q3KR16 790 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CCDC38Q502W7 563 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 PITRM1Q5JRX3 1037 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CFAP58Q5T655 872 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 DENND2CQ68D51 928 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 IL31Q6EBC2 164 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 UNC5AQ6ZN44 842 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 BZW1Q7L1Q6 419 aaKnown RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 SETD3Q86TU7 594 aaPredicted RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 ADIPOR2Q86V24 386 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 ZNF354CQ86Y25 554 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 MFN1Q8IWA4 741 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 ADGRG2Q8IZP9 1017 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 BBOF1Q8ND07 529 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 OR6K2Q8NGY2 324 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 FIBINQ8TAL6 211 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CCHCR1Q8TD31 782 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 FGF14Q92915 247 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 SMARCD2Q92925 531 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 IRF7Q92985 503 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 FATE1Q969F0 183 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 NXPE3Q969Y0 559 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 EXOC4Q96A65 974 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CFAP36Q96G28 342 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 SEMA3CQ99985 751 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 MGME1Q9BQP7 344 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 MUC3BQ9H195 1237 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 EBF3Q9H4W6 596 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 NOD2Q9HC29 1040 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 EIF2B3Q9NR50 452 aaKnown RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 SPHK2Q9NRA0 654 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 ABCB8Q9NUT2 735 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 LSM7Q9UK45 103 aaKnown RBP8.87□□□□□ -0.99
RIF1-208ENST00000457745 TRHDEQ9UKU6 1024 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 CDH7Q9ULB5 785 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 KCTD3Q9Y597 815 aa8.87□□□□□ -0.99
RIF1-208ENST00000457745 SMIM23A6NLE4 172 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 CCL22O00626 93 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 ZNF197O14709 1029 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 FAM155BO75949 473 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 TYRP14679 529 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 CREB1P16220 341 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 IGFBP4P22692 258 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 OAS2P29728 719 aaKnown RBP8.86□□□□□ -0.99
RIF1-208ENST00000457745 WEE1P30291 646 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 GMPRP36959 345 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 IFNAR2P48551 515 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 ARL4CP56559 192 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 WNT3AP56704 352 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 TRAF2Q12933 501 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 CDH18Q13634 790 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 HNRNPDQ14103 355 aaKnown RBP8.86□□□□□ -0.99
RIF1-208ENST00000457745 PTPRCAPQ14761 206 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 LONRF1Q17RB8 773 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 MPPE1Q53F39 396 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 DGKKQ5KSL6 1271 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 CEP85LQ5SZL2 805 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 ALG1LQ6GMV1 187 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 LRRC8BQ6P9F7 803 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 THSD4Q6ZMP0 1018 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 EP400NLQ6ZTU2 488 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 KIAA0907Q7Z7F0 614 aaPredicted RBP8.86□□□□□ -0.99
RIF1-208ENST00000457745 ZSWIM9Q86XI8 627 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 ETFBKMTQ8IXQ9 262 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 SLC25A41Q8N5S1 370 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 CELF5Q8N6W0 485 aaKnown RBP8.86□□□□□ -0.99
RIF1-208ENST00000457745 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.86□□□□□ -0.99
RIF1-208ENST00000457745 MYO19Q96H55 970 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 RPL10LQ96L21 214 aaKnown RBP8.86□□□□□ -0.99
RIF1-208ENST00000457745 MRGPRX3Q96LB0 322 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 TRIB3Q96RU7 358 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 FAM83CQ9BQN1 747 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 BBS2Q9BXC9 721 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 FAM129AQ9BZQ8 928 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 SLC25A51Q9H1U9 297 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 TNKS2Q9H2K2 1166 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 VIPAS39Q9H9C1 493 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 TMBIM4Q9HC24 238 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 ZDHHC4Q9NPG8 344 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 TMEM51Q9NW97 253 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 MARK1Q9P0L2 795 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 UBA2Q9UBT2 640 aaPredicted RBP8.86□□□□□ -0.99
RIF1-208ENST00000457745 SLC2A6Q9UGQ3 507 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 SLCO3A1Q9UIG8 710 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 VPS28Q9UK41 221 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 SPO11Q9Y5K1 396 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms