RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 LLGL1Q15334 1064 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 KAZNQ674X7 775 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 TMEFF1Q8IYR6 380 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 RYBPQ8N488 228 aaPredicted RBP28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 GANCQ8TET4 914 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 HDAC11Q96DB2 347 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 HES6Q96HZ4 224 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 PSKH2Q96QS6 385 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 CINPQ9BW66 212 aaPredicted RBP28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 ZDHHC6Q9H6R6 413 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 SGK2Q9HBY8 427 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 SEPT3Q9UH03 358 aa28.4■■■□□ 2.14
SMARCC1-203ENST00000454240 KPNA3O00505 521 aaPredicted RBP28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 DDX3YO15523 660 aaKnown RBP28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 GKP32189 559 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 CSNK1DP48730 415 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 DYNLT1P63172 113 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 POM121L1PQ3SYA9 428 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 TIGD7Q6NT04 549 aaPredicted RBP28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 NPNTQ6UXI9 565 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 UBL4BQ8N7F7 174 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 ARRDC3Q96B67 414 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 ZNF419Q96HQ0 510 aaPredicted RBP28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 EXOC2Q96KP1 924 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 GPR174Q9BXC1 333 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 EVLQ9UI08 416 aaPredicted RBP28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 EFR3BQ9Y2G0 817 aa28.39■■■□□ 2.14
SMARCC1-203ENST00000454240 RALGAPA1Q6GYQ0 2036 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 KRIT1O00522 736 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 MATN3O15232 486 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 PTPN7P35236 360 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 RGRP47804 291 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 NR2C2P49116 596 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 RAD51Q06609 339 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 CNTN1Q12860 1018 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 HNRNPDQ14103 355 aaKnown RBP28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 DEFB119Q8N690 84 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 TEX26Q8N6G2 289 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 CADM4Q8NFZ8 388 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 NSMCE1Q8WV22 266 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 MAML1Q92585 1016 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 OLFM3Q96PB7 478 aa28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 CPEB1Q9BZB8 566 aaKnown RBP28.38■■■□□ 2.13
SMARCC1-203ENST00000454240 PLK4O00444 970 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 MUSKO15146 869 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 INSIG1O15503 277 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 SLC7A4O43246 635 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 PYGMP11217 842 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 TGM2P21980 687 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 PTGER3P43115 390 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 RENBPP51606 427 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 PPIDQ08752 370 aaKnown RBP28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 MARC1Q5VT66 337 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 SLC41A1Q8IVJ1 513 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 OSBPL1AQ9BXW6 950 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 HDAC8Q9BY41 377 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 PCED1AQ9H1Q7 454 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 FRYLO94915 3013 aa28.37■■■□□ 2.13
SMARCC1-203ENST00000454240 EPN2O95208 641 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 SEMA4FO95754 770 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 RETP07949 1114 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 ITGB7P26010 798 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 DHPSP49366 369 aaPredicted RBP28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 ZNF33AQ06730 810 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 CCDC173Q0VFZ6 552 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 PDK1Q15118 436 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 AGBL4Q5VU57 503 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 BBS12Q6ZW61 710 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 BZW1Q7L1Q6 419 aaKnown RBP28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 PGBD5Q8N414 524 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 CCNYQ8ND76 341 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 LRRN4Q8WUT4 740 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 PPP1R16AQ96I34 528 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 LGMNQ99538 433 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 HERPUD2Q9BSE4 406 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 HEMGNQ9BXL5 484 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 OSBPL8Q9BZF1 889 aa28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 SAE1Q9UBE0 346 aaPredicted RBP28.36■■■□□ 2.13
SMARCC1-203ENST00000454240 OTOGLQ3ZCN5 2332 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 GPR179Q6PRD1 2367 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 HSPA9P38646 679 aaKnown RBP28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 MMP13P45452 471 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 ADPRHP54922 357 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 ZNF235Q14590 738 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 ZNF805Q5CZA5 627 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 PIP5KL1Q5T9C9 394 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 AADACL2Q6P093 401 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 GDPD4Q6W3E5 623 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 ERN2Q76MJ5 926 aaKnown RBP28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 SRLQ86TD4 932 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 CCDC13Q8IYE1 715 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 BBS5Q8N3I7 341 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 RUBCNQ92622 972 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 FOXJ1Q92949 421 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 ALS2CR12Q96Q35 445 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 MGME1Q9BQP7 344 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 BRD8Q9H0E9 1235 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 C6orf106Q9H6K1 298 aaPredicted RBP28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 DYRK4Q9NR20 520 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms