RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 ENDOD1O94919 500 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 KRT3P12035 628 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 MAT2AP31153 395 aaKnown RBP18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 CHRNA3P32297 505 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 MAN1A1P33908 653 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 GRK6P43250 576 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 RECQLP46063 649 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 CLCN6P51797 869 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 PPP2CBP62714 309 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 PPP2CAP67775 309 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 IL9RQ01113 521 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 CNTN1Q12860 1018 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 CCDC14Q49A88 953 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 DCUN1D2Q6PH85 259 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 RAB44Q7Z6P3 723 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 GLRX5Q86SX6 157 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 DAAM2Q86T65 1068 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 OR7D4Q8NG98 312 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 JOSD2Q8TAC2 188 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 MCEEQ96PE7 176 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 ATP13A1Q9HD20 1204 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 DYRK4Q9NR20 520 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 KMT2BQ9UMN6 2715 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 TMEM191CA6NGB0 347 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 GOLGA8CPA6NN73 597 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 MYO1FO00160 1098 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 FANCGO15287 622 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 GJB6O95452 261 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 WNT1P04628 370 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 ADRA1BP35368 520 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 CCDC15Q0P6D6 951 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 INAVAQ3KP66 663 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 PRAMEF14Q5SWL7 426 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 RETSATQ6NUM9 610 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 RWDD4Q6NW29 188 aaKnown RBP18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 ZNF783Q6ZMS7 281 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 ADAMTS14Q8WXS8 1223 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 GATA6Q92908 595 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 ELF4Q99607 663 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 GDF3Q9NR23 364 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 PPARGC1AQ9UBK2 798 aaKnown RBP18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 OR12D3Q9UGF7 316 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 IP6K2Q9UHH9 426 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 CABIN1Q9Y6J0 2220 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 USP24Q9UPU5 2620 aa18.36■□□□□ 0.53
SQSTM1-204ENST00000453046 A0A1B0GTQ1 180 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 TMEM8BA6NDV4 472 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 C2CD4BA6NLJ0 364 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 WNT9AO14904 365 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 SMAD6O43541 496 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 LATO43561 262 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 PCDHGA12O60330 932 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 PROSCO94903 275 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 PRNPP04156 253 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 GLDCP23378 1020 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 SLC1A1P43005 524 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 PTPN9P43378 593 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 GNA12Q03113 381 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 RAB6CQ53S08 254 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 AGBL4Q5VU57 503 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 NAPEPLDQ6IQ20 393 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 C22orf39Q6P5X5 142 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 STRADAQ7RTN6 431 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 PEX26Q7Z412 305 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 SLCO6A1Q86UG4 719 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 NIPA2Q8N8Q9 360 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 TMIEQ8NEW7 156 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 OR2A12Q8NGT7 310 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 FAM172AQ8WUF8 416 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 ZNF592Q92610 1267 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 FAM131CQ96AQ9 280 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 RAB6CQ9H0N0 254 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 TNKS2Q9H2K2 1166 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 ZMIZ1Q9ULJ6 1067 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 DMTF1Q9Y222 760 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 BTBD3Q9Y2F9 522 aa18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 NYNRINQ9P2P1 1898 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-204ENST00000453046 A0A1W2PR77 199 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 FTCDO95954 541 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 CTSLP07711 333 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 NUDT1P36639 197 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 ETFBP38117 255 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 DNA2P51530 1060 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 RPL7AP62424 266 aaKnown RBP18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 SLC20A2Q08357 652 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 PIGHQ14442 188 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 MESDQ14696 234 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 STAT4Q14765 748 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 SETMARQ53H47 684 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 NT5DC3Q86UY8 548 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 KDF1Q8NAX2 398 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 BAHD1Q8TBE0 780 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 GRIN3AQ8TCU5 1115 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 PPP1R16AQ96I34 528 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 TRIM7Q9C029 511 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 PREBQ9HCU5 417 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 IL36AQ9UHA7 158 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 AMFRQ9UKV5 643 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms