RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 IFT43Q96FT9 208 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 C1orf74Q96LT6 269 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 HAPLN3Q96S86 360 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 DUSP23Q9BVJ7 150 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 RAB6CQ9H0N0 254 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 ABCG4Q9H172 646 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 GPR27Q9NS67 375 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
GARNL3-210ENST00000453030 HECAQ9UBI9 543 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-210ENST00000453030 IPO11Q9UI26 975 aaKnown RBP11.89□□□□□ -0.51
GARNL3-210ENST00000453030 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 TEX51A0A1B0GUA7 166 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 CPED1A4D0V7 1026 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 NEMP1O14524 444 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 FPGTO14772 594 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 LSM8O95777 96 aaKnown RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 CSF2P04141 144 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 GP1BAP07359 652 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 NME1P15531 152 aaKnown RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 JUNDP17535 347 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 RABIFP47224 123 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 DUSP3P51452 185 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 UBE2HP62256 183 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 NOMO3P69849 1222 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 C15orf59Q2T9L4 293 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 DEFB133Q30KQ1 61 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 DPCR1Q3MIW9 517 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 C3orf38Q5JPI3 329 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 ACBD5Q5T8D3 534 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 RWDD4Q6NW29 188 aaKnown RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 DPY19L2P1Q6NXN4 242 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 ZCCHC8Q6NZY4 707 aaKnown RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 GUSBP11Q6P575 273 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 LEKR1Q6ZMV7 388 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 PHLDB2Q86SQ0 1253 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 DCP2Q8IU60 420 aaKnown RBP11.88□□□□□ -0.51
GARNL3-210ENST00000453030 RBFAQ8N0V3 343 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 FAM174AQ8TBP5 190 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 LMX1AQ8TE12 382 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 FEM1CQ96JP0 617 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 CPNE5Q9HCH3 593 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 TMEM59LQ9UK28 342 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 HS3ST3A1Q9Y663 406 aa11.88□□□□□ -0.51
GARNL3-210ENST00000453030 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 AHCTF1Q8WYP5 2266 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 C16orf96A6NNT2 1141 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 F8VZ95 297 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 TK2O00142 265 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 KRIT1O00522 736 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SPINT1O43278 529 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 AQP9O43315 295 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 AP1G1O43747 822 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 CD160O95971 181 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 UGT2B4P06133 528 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 UCHL3P15374 230 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 TGM2P21980 687 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SLC20A2Q08357 652 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SGCGQ13326 291 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 ATXN7L2Q5T6C5 722 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 KLHDC7AQ5VTJ3 777 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 BROXQ5VW32 411 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 EFL1Q7Z2Z2 1120 aaKnown RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 BNIPLQ7Z465 357 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 FAM181AQ8N9Y4 354 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SLC20A1Q8WUM9 679 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 KCNE4Q8WWG9 221 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 ZNF578Q96N58 590 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 TCEAL2Q9H3H9 227 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SYNDIG1Q9H7V2 258 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 POLR1BQ9H9Y6 1135 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 USP29Q9HBJ7 922 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 PPARGC1AQ9UBK2 798 aaKnown RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 APOBEC3BQ9UH17 382 aaKnown RBP11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SATB2Q9UPW6 733 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 SCN8AQ9UQD0 1980 aa11.87□□□□□ -0.51
GARNL3-210ENST00000453030 FAM72CH0Y354 149 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 MUSKO15146 869 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 KLK10O43240 276 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 TSPAN6O43657 245 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 GJB6O95452 261 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 IGFALSP35858 605 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 ETFBP38117 255 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 LSSP48449 732 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 TMPRSS3P57727 454 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 EIF2B5Q13144 721 aaKnown RBP11.86□□□□□ -0.51
GARNL3-210ENST00000453030 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-210ENST00000453030 ISXQ2M1V0 245 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 TAF1BQ53T94 588 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-210ENST00000453030 ZNF805Q5CZA5 627 aa11.86□□□□□ -0.51
GARNL3-210ENST00000453030 ARHGAP40Q5TG30 622 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms