RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 STX1BP61266 288 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 FPGSQ05932 587 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 VAC14Q08AM6 782 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 CDC20Q12834 499 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 CUL2Q13617 745 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 BROXQ5VW32 411 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 SLC39A4Q6P5W5 647 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 OR2T34Q8NGX1 318 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 OR2T3Q8NH03 318 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 VMP1Q96GC9 406 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 COQ7Q99807 217 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 AMNQ9BXJ7 453 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 MTMR12Q9C0I1 747 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 OR2B2Q9GZK3 357 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 SDCBP2Q9H190 292 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 ABCB10Q9NRK6 738 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 PIH1D1Q9NWS0 290 aaKnown RBP18.87■□□□□ 0.61
PTPA-223ENST00000452489 ZDHHC2Q9UIJ5 367 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 KIAA1257Q9ULG3 409 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 WDR27A2RRH5 827 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 MAPTP10636 758 aaKnown RBP18.87■□□□□ 0.61
PTPA-223ENST00000452489 CD40LGP29965 261 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 SLC26A2P50443 739 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 RPL14P50914 215 aaKnown RBP18.87■□□□□ 0.61
PTPA-223ENST00000452489 WNT7BP56706 349 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 CATSPEREQ5SY80 951 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 LYPD8Q6UX82 237 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 CMTR2Q8IYT2 770 aaKnown RBP18.87■□□□□ 0.61
PTPA-223ENST00000452489 EMC1Q8N766 993 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 PNPT1Q8TCS8 783 aaKnown RBP18.87■□□□□ 0.61
PTPA-223ENST00000452489 FAM213AQ9BRX8 229 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 ALOXE3Q9BYJ1 711 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 AGPAT4Q9NRZ5 378 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 CACNA2D2Q9NY47 1150 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 PKD2L1Q9P0L9 805 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 TJP2Q9UDY2 1190 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 CD300AQ9UGN4 299 aa18.87■□□□□ 0.61
PTPA-223ENST00000452489 UGT2B11O75310 529 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 ALDH1A2O94788 518 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 TFEBP19484 476 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 ITIH1P19827 911 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 MAGP20916 626 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 ALDH4A1P30038 563 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 MAGEA3P43357 314 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 GABPAQ06546 454 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 PIGFQ07326 219 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 PPIL2Q13356 520 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 INSCQ1MX18 579 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 TMEM236Q5W0B7 351 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 CASC4Q6P4E1 433 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 OSTM1Q86WC4 334 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 SFRP1Q8N474 314 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 LSMEM1Q8N8F7 131 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 MAGEE2Q8TD90 523 aaPredicted RBP18.86■□□□□ 0.61
PTPA-223ENST00000452489 ZNF577Q9BSK1 485 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
PTPA-223ENST00000452489 WDR6Q9NNW5 1121 aaKnown RBP18.86■□□□□ 0.61
PTPA-223ENST00000452489 SPAG4Q9NPE6 437 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 MTMR10Q9NXD2 777 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 SMPD3Q9NY59 655 aaPredicted RBP18.86■□□□□ 0.61
PTPA-223ENST00000452489 FOCADQ5VW36 1801 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 GAKO14976 1311 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
PTPA-223ENST00000452489 F5H423 210 aaPredicted RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 SLC22A1O15245 554 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 TRIM13O60858 407 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 STAM2O75886 525 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 RASAL1O95294 804 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 PIGNO95427 931 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 ARP10275 920 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 SEPHS1P49903 392 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 PPP2R2BQ00005 443 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 MPP1Q00013 466 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 IRF9Q00978 393 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 NIPAL4Q0D2K0 466 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 CBLBQ13191 982 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 CTF1Q16619 201 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 ZCCHC8Q6NZY4 707 aaKnown RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 TFAP2DQ7Z6R9 452 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 PQLC3Q8N755 202 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 LRRC39Q96DD0 335 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 C9orf16Q9BUW7 83 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 MIR1-1HGQ9H1L0 117 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 TBX20Q9UMR3 447 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 ROBO1Q9Y6N7 1651 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 GPC4O75487 556 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 CCNKO75909 580 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 ARCN1P48444 511 aaKnown RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 CNTN2Q02246 1040 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 IKQ13123 557 aaPredicted RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 HADHQ16836 314 aaKnown RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 KIZQ2M2Z5 673 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 ARL13AQ5H913 290 aaPredicted RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 TDRD10Q5VZ19 366 aaKnown RBP18.85■□□□□ 0.61
PTPA-223ENST00000452489 REP15Q6BDI9 236 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 PMF1Q6P1K2 205 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 NEK5Q6P3R8 708 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
PTPA-223ENST00000452489 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms