RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 RCOR3Q9P2K3 495 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 ZFR2Q9UPR6 939 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-205ENST00000452128 NYNRINQ9P2P1 1898 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 A0A1B0GVT2 93 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 FAM47DPA6NHR8 397 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 H3BRJ5 948 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 KPNA3O00505 521 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 VILLO15195 856 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 SYPP08247 313 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 RECQLP46063 649 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 GRIA4P48058 902 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 CSNK1DP48730 415 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 DNA2P51530 1060 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 AFF3P51826 1226 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 SNRPD1P62314 119 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 KIF19Q2TAC6 998 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 ZNF284Q2VY69 593 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 TMEM259Q4ZIN3 620 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 MINDY1Q8N5J2 469 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 OR6K2Q8NGY2 324 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 GRIN3AQ8TCU5 1115 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 HSPH1Q92598 858 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 PANX2Q96RD6 677 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 CPEB1Q9BZB8 566 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 FADS3Q9Y5Q0 445 aa16.36■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3DA0A087WVF3 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3IA0A087WXS9 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3EA0A087X179 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3KA0A087X1G2 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 MED19A0JLT2 244 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3FA6NER0 549 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 ARHGAP42A6NI28 874 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 C3orf70A6NLC5 250 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3LB9A6J9 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 AREL1O15033 823 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 MUSKO15146 869 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 INSIG1O15503 277 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 AP1G1O43747 822 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3HP0C7X1 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 CSRP1P21291 193 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 ARHGAP25P42331 645 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 CTSKP43235 329 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 MAPK8P45983 427 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 RGRP47804 291 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 HADHBP55084 474 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 IL10RBQ08334 325 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 MMRN1Q13201 1228 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 DPYSL3Q14195 570 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 FGL2Q14314 439 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 ZNF805Q5CZA5 627 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3GQ6DHY5 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3CQ6IPX1 549 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 PARS2Q7L3T8 475 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TBC1D3Q8IZP1 549 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 TMEM145Q8NBT3 493 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 PCDH19Q8TAB3 1148 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 SLC6A18Q96N87 628 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 DEF6Q9H4E7 631 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 DKK3Q9UBP4 350 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 UBA2Q9UBT2 640 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 IPO11Q9UI26 975 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 LCMT1Q9UIC8 334 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 ANKRD6Q9Y2G4 727 aa16.35■□□□□ 0.21
SCAMP4-205ENST00000452128 C16orf96A6NNT2 1141 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 DAPK3O43293 454 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 MAFKO60675 156 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 KCNK5O95279 499 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 ZNF883P0CG24 379 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 ADRB3P13945 408 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 TIMP2P16035 220 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 NUDT1P36639 197 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 ARL4AP40617 200 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 ABL2P42684 1182 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 NSUN2Q08J23 767 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 SLC14A1Q13336 389 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 HADHQ16836 314 aaKnown RBP16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 HLA-BQ31612 363 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 LAYNQ6UX15 382 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 HORMAD1Q86X24 394 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 RHOT2Q8IXI1 618 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 PQLC3Q8N755 202 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 RFFLQ8WZ73 363 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 SNX19Q92543 992 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 RAPGEF5Q92565 580 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 GDAP1L1Q96MZ0 367 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 DMTF1Q9Y222 760 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 SNX11Q9Y5W9 270 aa16.34■□□□□ 0.21
SCAMP4-205ENST00000452128 TSPAN11A1L157 253 aa16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 RNGTTO60942 597 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 CR2P20023 1033 aa16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 NEK3P51956 506 aa16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 CDH6P55285 790 aa16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 FOXK2Q01167 660 aa16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 RFTN1Q14699 578 aaPredicted RBP16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 PAFAH1B3Q15102 231 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 ZNF423Q2M1K9 1284 aa16.33■□□□□ 0.2
SCAMP4-205ENST00000452128 LRRC38Q5VT99 294 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms