RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TMEM63AO94886 807 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 IGSF6O95976 241 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 SRPRAP08240 638 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 ITIH2P19823 946 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 DRG2P55039 364 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 SEC13P55735 322 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 SPARCL1Q14515 664 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 KCNJ11Q14654 390 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 PCSK7Q16549 785 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 DGKKQ5KSL6 1271 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 ZDHHC24Q6UX98 284 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 TPRG1Q6ZUI0 275 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 Q6ZVU0 165 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 PCGF5Q86SE9 256 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 IPMKQ8NFU5 416 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 FBXO25Q8TCJ0 367 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 RUBCNQ92622 972 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 EXOC4Q96A65 974 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 IMP4Q96G21 291 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 SORCS3Q9UPU3 1222 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 CXorf51AA0A1B0GTR3 108 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 GOLGA6CA6NDK9 693 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 GOLGA6BA6NDN3 693 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 ANXA9O76027 345 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 GOLGA6DP0CG33 693 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 MYBL2P10244 700 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 OLIG2Q13516 323 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 MORF4L2Q15014 288 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 EGFLAMQ63HQ2 1017 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 HIBCHQ6NVY1 386 aaPredicted RBP14.83□□□□□ -0.04
TNF-208ENST00000449264 SUGP1Q8IWZ8 645 aaKnown RBP14.83□□□□□ -0.04
TNF-208ENST00000449264 NAT8LQ8N9F0 302 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 ARRDC2Q8TBH0 407 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 PRCCQ92733 491 aaPredicted RBP14.83□□□□□ -0.04
TNF-208ENST00000449264 MYO19Q96H55 970 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 GDAP1L1Q96MZ0 367 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 CEP44Q9C0F1 390 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 NOD2Q9HC29 1040 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 GOLGA6AQ9NYA3 693 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 CA14Q9ULX7 337 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 SLC8A2Q9UPR5 921 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 SHOC2Q9UQ13 582 aa14.83□□□□□ -0.04
TNF-208ENST00000449264 NDC80O14777 642 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 TP73O15350 636 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 INSIG1O15503 277 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 TIMM44O43615 452 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ATP9BO43861 1147 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 USP12O75317 370 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ZNF821O75541 412 aaPredicted RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 EGFP01133 1207 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 MMP2P08253 660 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 HLA-EP13747 358 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 TNFRSF8P28908 595 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ECHS1P30084 290 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 GEMP55040 296 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 SNRPD1P62314 119 aaKnown RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 MTM1Q13496 603 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ZNF234Q14588 700 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 SLC44A4Q53GD3 710 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ALG1LQ6GMV1 187 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 WDR93Q6P2C0 686 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 SERPINA13PQ6UXR4 307 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 KDELC2Q7Z4H8 507 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 PRPF39Q86UA1 669 aaKnown RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 HOOK3Q86VS8 718 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 PCDH20Q8N6Y1 951 aaKnown RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 OR2AP1Q8NGE2 309 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ATXN2LQ8WWM7 1075 aaKnown RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 ART4Q93070 314 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 NUDCD1Q96RS6 583 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 APOL2Q9BQE5 337 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 FSD1LQ9BXM9 530 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 MTG2Q9H4K7 406 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 ZDHHC18Q9NUE0 388 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 FAM153AQ9UHL3 310 aa14.82□□□□□ -0.04
TNF-208ENST00000449264 EVLQ9UI08 416 aaPredicted RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 AAR2Q9Y312 384 aaKnown RBP14.82□□□□□ -0.04
TNF-208ENST00000449264 C19orf67A6NJJ6 358 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 AP2A1O95782 977 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 SERPINF2P08697 491 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 CR2P20023 1033 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 TPSB2P20231 275 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 CD72P21854 359 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 MCM3P25205 808 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 GKP32189 559 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 RECQLP46063 649 aaPredicted RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 SKOR1P84550 965 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 GRSF1Q12849 480 aaKnown RBP eCLIP14.81□□□□□ -0.04
TNF-208ENST00000449264 TPSAB1Q15661 275 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 MLF2Q15773 248 aaPredicted RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 EMC10Q5UCC4 262 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 FSTL4Q6MZW2 842 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 SRLQ86TD4 932 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 ZNF513Q8N8E2 541 aaPredicted RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 EZH1Q92800 747 aaPredicted RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 ISG20Q96AZ6 181 aaKnown RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 ERLEC1Q96DZ1 483 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 PWWP2AQ96N64 755 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 PPP1R2P1Q96PQ5 205 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms