RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TEKT4Q8WW24 435 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 RFFLQ8WZ73 363 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 HMCESQ96FZ2 354 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 CELF6Q96J87 481 aaKnown RBP14.84□□□□□ -0.03
USP39-206ENST00000448971 FAM129BQ96TA1 746 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 TM6SF2Q9BZW4 377 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 CEP44Q9C0F1 390 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 SERGEFQ9UGK8 458 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 SUSD2Q9UGT4 822 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 PCDHB9Q9Y5E1 797 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 ACTL7AQ9Y615 435 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 ZSCAN5CA6NGD5 496 aaPredicted RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 FAM47DPA6NHR8 397 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 GOLGA6L6A8MZA4 724 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 KPNA3O00505 521 aaPredicted RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 MCF2LO15068 1137 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 BUB1O43683 1085 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 IPO7O95373 1038 aaKnown RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 GNSP15586 552 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 ERCC2P18074 760 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 CDH6P55285 790 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 SLC20A2Q08357 652 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 GRIK2Q13002 908 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 MESDQ14696 234 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 SPA17Q15506 151 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 TXNRD3NBQ6F5E7 133 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 C19orf48Q6RUI8 117 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 DBX2Q6ZNG2 339 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 UMODL1-AS1Q8N2C9 162 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 RYBPQ8N488 228 aaPredicted RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 CADM4Q8NFZ8 388 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 OR2A12Q8NGT7 310 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 SLC35G2Q8TBE7 412 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 PANX2Q96RD6 677 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 ZDHHC5Q9C0B5 715 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 MIR1-1HGQ9H1L0 117 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 NOL6Q9H6R4 1146 aaKnown RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 SGK2Q9HBY8 427 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 LUC7LQ9NQ29 371 aaKnown RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 DYRK4Q9NR20 520 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 KLHL11Q9NVR0 708 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 PCOLCE2Q9UKZ9 415 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 FZD4Q9ULV1 537 aa14.83□□□□□ -0.04
USP39-206ENST00000448971 GCN1Q92616 2671 aaKnown RBP14.83□□□□□ -0.04
USP39-206ENST00000448971 CXorf51AA0A1B0GTR3 108 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 A0A1B0GTW7 788 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 ARHGAP42A6NI28 874 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 SOWAHDA6NJG2 315 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 DFFAO00273 331 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 KDELR3O43731 214 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 FSBPO95073 299 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 PRNPP04156 253 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 CHRNA3P32297 505 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 MAN1A1P33908 653 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 MAGEA1P43355 309 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 NDST2P52849 883 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 METAP1P53582 386 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 BNC1Q01954 994 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 SOWAHCQ53LP3 525 aaPredicted RBP14.82□□□□□ -0.04
USP39-206ENST00000448971 TMCO3Q6UWJ1 677 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 DPY19L3Q6ZPD9 716 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 CPNE8Q86YQ8 564 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 CCDC170Q8IYT3 715 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 AADATQ8N5Z0 425 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 SPC24Q8NBT2 197 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 C1orf216Q8TAB5 229 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 PPP1R16AQ96I34 528 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 PCED1AQ9H1Q7 454 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 C6orf106Q9H6K1 298 aaPredicted RBP14.82□□□□□ -0.04
USP39-206ENST00000448971 ZDHHC6Q9H6R6 413 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 SP110Q9HB58 689 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 IL21RQ9HBE5 538 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 PCDH18Q9HCL0 1135 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 CWC15Q9P013 229 aaKnown RBP14.82□□□□□ -0.04
USP39-206ENST00000448971 IL36AQ9UHA7 158 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 INTUQ9ULD6 942 aa14.82□□□□□ -0.04
USP39-206ENST00000448971 LRRC72A6NJI9 287 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 METTL12A8MUP2 240 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 PLK4O00444 970 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 TMCC1O94876 653 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 KRT7P08729 469 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 C7P10643 843 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CDC25BP30305 580 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 SERPINB6P35237 376 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 HCAR3P49019 387 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CCNHP51946 323 aaPredicted RBP14.81□□□□□ -0.04
USP39-206ENST00000448971 ADPRHP54922 357 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 RHOAP61586 193 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 SERINC3Q13530 473 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 DPYSQ14117 519 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CARD16Q5EG05 197 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
USP39-206ENST00000448971 NPWQ8N729 165 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CHST14Q8NCH0 376 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 OR14C36Q8NHC7 312 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CSPG4P5Q96PW8 444 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CALN1Q9BXU9 219 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms