RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 MYLK3Q32MK0 819 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 INAVAQ3KP66 663 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 EFHC2Q5JST6 749 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 ATXN7L2Q5T6C5 722 aaPredicted RBP21.1■□□□□ 0.97
SDC1-205ENST00000447124 SFMBT2Q5VUG0 894 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 PLEKHA7Q6IQ23 1121 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 DHRS13Q6UX07 377 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 RYBPQ8N488 228 aaPredicted RBP21.1■□□□□ 0.97
SDC1-205ENST00000447124 OXR1Q8N573 874 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 PPP1R16AQ96I34 528 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 FEM1CQ96JP0 617 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 CNDP2Q96KP4 475 aaKnown RBP21.1■□□□□ 0.97
SDC1-205ENST00000447124 BMFQ96LC9 184 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 GPATCH2LQ9NWQ4 482 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 HPCAL4Q9UM19 191 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 A0A1W2PQC6 194 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 DDX3XO00571 662 aaKnown RBP eCLIP21.09■□□□□ 0.972e-9■■■□□ 15.7
SDC1-205ENST00000447124 RAD51BO15315 384 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 ATMINO43313 823 aaPredicted RBP21.09■□□□□ 0.97
SDC1-205ENST00000447124 BUB1O43683 1085 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 POP4O95707 220 aaKnown RBP21.09■□□□□ 0.97
SDC1-205ENST00000447124 PAK4O96013 591 aaPredicted RBP21.09■□□□□ 0.97
SDC1-205ENST00000447124 GSRP00390 522 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 HNRNPA2B1P22626 353 aaKnown RBP21.09■□□□□ 0.97
SDC1-205ENST00000447124 ABL2P42684 1182 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 ASIC2Q16515 512 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 FBXL19Q6PCT2 694 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 GCNT7Q6ZNI0 430 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 TMC6Q7Z403 805 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 SLC25A45Q8N413 288 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 OR13H1Q8NG92 308 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 OR2AP1Q8NGE2 309 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 TSC1Q92574 1164 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 HMCESQ96FZ2 354 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 SLC17A9Q9BYT1 436 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 TTYH3Q9C0H2 523 aa21.09■□□□□ 0.97
SDC1-205ENST00000447124 ZFHX4Q86UP3 3567 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 FAM149AA5PLN7 773 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 ANKRD62A6NC57 917 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 C16orf96A6NNT2 1141 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 RASA4BC9J798 803 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 RASA4O43374 803 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 AP1G1O43747 822 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 SDC3O75056 442 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 SKILP12757 684 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 AKT2P31751 481 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 PRKCIP41743 596 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 GEMIN4P57678 1058 aaKnown RBP21.08■□□□□ 0.97
SDC1-205ENST00000447124 SNRPD1P62314 119 aaKnown RBP21.08■□□□□ 0.97
SDC1-205ENST00000447124 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
SDC1-205ENST00000447124 SMAD1Q15797 465 aaKnown RBP21.08■□□□□ 0.97
SDC1-205ENST00000447124 CA9Q16790 459 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 FILIP1LQ4L180 1135 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 ZNF805Q5CZA5 627 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 ABI3BPQ7Z7G0 1075 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 WDFY3Q8IZQ1 3526 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 UMODL1-AS1Q8N2C9 162 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 LRIG1Q96JA1 1093 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 TRIM7Q9C029 511 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 KLHL11Q9NVR0 708 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 GGT7Q9UJ14 662 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 RALYQ9UKM9 306 aaKnown RBP21.08■□□□□ 0.97
SDC1-205ENST00000447124 HS3ST3A1Q9Y663 406 aa21.08■□□□□ 0.97
SDC1-205ENST00000447124 FREM2Q5SZK8 3169 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 TMEM191CA6NGB0 347 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 KRIT1O00522 736 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 SPINT1O43278 529 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 TMCC1O94876 653 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 FTLP02792 175 aaPredicted RBP21.07■□□□□ 0.96
SDC1-205ENST00000447124 UGT2B4P06133 528 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 AIF1P55008 147 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 CLDN6P56747 220 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 YBEYP58557 167 aaPredicted RBP21.07■□□□□ 0.96
SDC1-205ENST00000447124 RPS21P63220 83 aaKnown RBP21.07■□□□□ 0.96
SDC1-205ENST00000447124 SERINC3Q13530 473 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 CAMK2BQ13554 666 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 CYTH1Q15438 398 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 INO80DQ53TQ3 878 aaPredicted RBP21.07■□□□□ 0.96
SDC1-205ENST00000447124 Q6ZSR6 202 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 SLC22A18ASQ8N1D0 253 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 KLHL32Q96NJ5 620 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 PEBP4Q96S96 227 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 KLF6Q99612 283 aaPredicted RBP21.07■□□□□ 0.96
SDC1-205ENST00000447124 EPAS1Q99814 870 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 C1QTNF2Q9BXJ5 285 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 PARVAQ9NVD7 372 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 PCDHGA1Q9Y5H4 931 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 PKD1L2Q7Z442 2459 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 APC2O95996 2303 aa21.07■□□□□ 0.96
SDC1-205ENST00000447124 TDRD6O60522 2096 aaKnown RBP21.06■□□□□ 0.96
SDC1-205ENST00000447124 ACACAQ13085 2346 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 POM121BA6NF01 834 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 ZSCAN5CA6NGD5 496 aaPredicted RBP21.06■□□□□ 0.96
SDC1-205ENST00000447124 IGLON5A6NGN9 336 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 TRIM38O00635 465 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 GZMAP12544 262 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 ITIH2P19823 946 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 PSMA2P25787 234 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 ACADVLP49748 655 aa21.06■□□□□ 0.96
SDC1-205ENST00000447124 KIAA1161Q6NSJ0 714 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms