RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 CCDC63Q8NA47 563 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 VPS39Q96JC1 886 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 C7orf26Q96N11 449 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 TSNARE1Q96NA8 513 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 KLHL5Q96PQ7 755 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 GPR22Q99680 433 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 MGME1Q9BQP7 344 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 CINPQ9BW66 212 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 CHRAC1Q9NRG0 131 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 IARS2Q9NSE4 1012 aaKnown RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 TREX1Q9NSU2 369 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 SIRPGQ9P1W8 387 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 PRKAG2Q9UGJ0 569 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 H3BNC9 293 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 LILRB3O75022 631 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 EPOP01588 193 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 LRG1P02750 347 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 APOA4P06727 396 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SERPINF2P08697 491 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 IRF1P10914 325 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 TPH1P17752 444 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 CDC25CP30307 473 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 ACVRL1P37023 503 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 MAGEA9P43362 315 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 THOC5Q13769 683 aaKnown RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 PDE1CQ14123 709 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SPDYAQ5MJ70 313 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 IL31Q6EBC2 164 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 RFWD3Q6PCD5 774 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 DCLK2Q8N568 766 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 ARMC2Q8NEN0 867 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 ARRDC2Q8TBH0 407 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SREK1Q8WXA9 508 aaKnown RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 MRPS31Q92665 395 aaKnown RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 IFT43Q96FT9 208 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 MCMBPQ9BTE3 642 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 TRIM55Q9BYV6 548 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SLC13A1Q9BZW2 595 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SLCO1B3Q9NPD5 702 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 RIMKLBQ9ULI2 386 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 SLC12A4Q9UP95 1085 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 LZTS1Q9Y250 596 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 TBC1D30Q9Y2I9 924 aa13.33□□□□□ -0.28
CPSF4-206ENST00000441580 HELZP42694 1942 aaKnown RBP13.33□□□□□ -0.28
CPSF4-206ENST00000441580 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 WDR91A4D1P6 747 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 C2orf78A6NCI8 922 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 KDELR3O43731 214 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 PLIN3O60664 434 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 H2AFYO75367 372 aaKnown RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 F11P03951 625 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 BPGMP07738 259 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 MMP2P08253 660 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 ACRP10323 421 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 BGNP21810 368 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 MAXP61244 160 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 TMPRSS15P98073 1019 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 FPGSQ05932 587 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 CDK18Q07002 472 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 ACTN3Q08043 901 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 TSTD2Q5T7W7 516 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 N4BP2L1Q5TBK1 243 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 TMCO2Q7Z6W1 182 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 ZC3HC1Q86WB0 502 aaKnown RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 FAM217AQ8IXS0 508 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 C10orf82Q8WW14 230 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 AUTS2Q8WXX7 1259 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 MYEOVQ96EZ4 313 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
CPSF4-206ENST00000441580 PSKH2Q96QS6 385 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 SEMA3CQ99985 751 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 SIKE1Q9BRV8 207 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 EMILIN2Q9BXX0 1053 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 TRPC7Q9HCX4 862 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 ABCF3Q9NUQ8 709 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 IL1RAPL1Q9NZN1 696 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 INSL6Q9Y581 213 aa13.32□□□□□ -0.28
CPSF4-206ENST00000441580 LOC285095A0A1B0GVY8 99 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 DNAJC8O75937 253 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 FGF19O95750 216 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 KLKB1P03952 638 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 PROCP04070 461 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ATP5BP06576 529 aaKnown RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ATXN1LP0C7T5 689 aaKnown RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 CA8P35219 290 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms