RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PMLP29590 882 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 OXTRP30559 389 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 RECQLP46063 649 aaPredicted RBP17.99■□□□□ 0.47
CCDC188-201ENST00000439765 HCAR3P49019 387 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 SLC20A2Q08357 652 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 N4BP2L1Q5TBK1 243 aaPredicted RBP17.99■□□□□ 0.47
CCDC188-201ENST00000439765 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 PEX26Q7Z412 305 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 NT5DC3Q86UY8 548 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 ARHGAP12Q8IWW6 846 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 TP53INP2Q8IXH6 220 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 PCDH20Q8N6Y1 951 aaKnown RBP17.99■□□□□ 0.47
CCDC188-201ENST00000439765 OR6K2Q8NGY2 324 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 UBE2Q2Q8WVN8 375 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 TSC1Q92574 1164 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 CNTNAP3BQ96NU0 1288 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 OMDQ99983 421 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 CNTNAP3Q9BZ76 1288 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 AMFRQ9UKV5 643 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 SCML1Q9UN30 329 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 FARP1Q9Y4F1 1045 aaPredicted RBP17.99■□□□□ 0.47
CCDC188-201ENST00000439765 FAM47DPA6NHR8 397 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 ARHGAP42A6NI28 874 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 C1QTNF3-AMACRE9PGA6 284 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 SPOPO43791 374 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF500O60304 480 aaPredicted RBP17.98■□□□□ 0.47
CCDC188-201ENST00000439765 FTCDO95954 541 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 TNNT1P13805 278 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 C5AR1P21730 350 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 KCNA4P22459 653 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
CCDC188-201ENST00000439765 CCNHP51946 323 aaPredicted RBP17.98■□□□□ 0.47
CCDC188-201ENST00000439765 ETF1P62495 437 aaKnown RBP17.98■□□□□ 0.47
CCDC188-201ENST00000439765 DPYSL3Q14195 570 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 DPY19L3Q6ZPD9 716 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 RABEPKQ7Z6M1 372 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 RYBPQ8N488 228 aaPredicted RBP17.98■□□□□ 0.47
CCDC188-201ENST00000439765 HDDC3Q8N4P3 179 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 CEP76Q8TAP6 659 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 PIP4K2CQ8TBX8 421 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 C16orf45Q96MC5 204 aaPredicted RBP17.98■□□□□ 0.47
CCDC188-201ENST00000439765 BTBD1Q9H0C5 482 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
CCDC188-201ENST00000439765 DOCK9Q9BZ29 2069 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 MEI4A8MW99 385 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 J3KR12 359 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 RNF103O00237 685 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 SEMA4FO95754 770 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 CSRP1P21291 193 aaKnown RBP17.97■□□□□ 0.47
CCDC188-201ENST00000439765 CHRNA3P32297 505 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 DRD3P35462 400 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 ARSEP51690 589 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 DUOXA1Q1HG43 343 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 MEI1Q5TIA1 1274 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 AFMIDQ63HM1 303 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 ARHGAP36Q6ZRI8 547 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 USP30Q70CQ3 517 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 SNX19Q92543 992 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF419Q96HQ0 510 aaPredicted RBP17.97■□□□□ 0.47
CCDC188-201ENST00000439765 EXOC2Q96KP1 924 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 WDR24Q96S15 920 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 NEUROG2Q9H2A3 272 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 C6orf106Q9H6K1 298 aaPredicted RBP17.97■□□□□ 0.47
CCDC188-201ENST00000439765 ZDHHC6Q9H6R6 413 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 SP110Q9HB58 689 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 PDFQ9HBH1 243 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 CAPN10Q9HC96 672 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 RCOR3Q9P2K3 495 aaPredicted RBP17.97■□□□□ 0.47
CCDC188-201ENST00000439765 UBA2Q9UBT2 640 aaPredicted RBP17.97■□□□□ 0.47
CCDC188-201ENST00000439765 IL36AQ9UHA7 158 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 PPM1HQ9ULR3 514 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 JRKLQ9Y4A0 524 aa17.97■□□□□ 0.47
CCDC188-201ENST00000439765 TMEM131Q92545 1883 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 KPNA3O00505 521 aaPredicted RBP17.96■□□□□ 0.47
CCDC188-201ENST00000439765 TUBB4AP04350 444 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 ENGP17813 658 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 IL4RP24394 825 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 NOVA1P51513 510 aaKnown RBP17.96■□□□□ 0.47
CCDC188-201ENST00000439765 SHC2P98077 582 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 ATXN7L2Q5T6C5 722 aaPredicted RBP17.96■□□□□ 0.47
CCDC188-201ENST00000439765 FAM46CQ5VWP2 391 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 PSAPL1Q6NUJ1 521 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 RGL4Q8IZJ4 473 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 FAM71BQ8TC56 605 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF670Q9BS34 389 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 FZD4Q9ULV1 537 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 SLC6A14Q9UN76 642 aa17.96■□□□□ 0.47
CCDC188-201ENST00000439765 CXorf51AA0A1B0GTR3 108 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 LRRD1A4D1F6 860 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 KIF2AO00139 706 aaPredicted RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 MFSD11O43934 449 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 PRAMEF11O60813 436 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 LEFTY1O75610 366 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 PRNPP04156 253 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 KRT1P04264 644 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 SERPINF2P08697 491 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 MAOBP27338 520 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 SERPINB6P35237 376 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 ADPRHP54922 357 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms