RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ABCD3P28288 659 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 FMO4P31512 558 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 AVPR1AP37288 418 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 NR1H2P55055 460 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 UFM1P61960 85 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 PTP4A2Q12974 167 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 RALBP1Q15311 655 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 ME3Q16798 604 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 PRICKLE4Q2TBC4 344 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 SLC4A8Q2Y0W8 1093 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 FBXO43Q4G163 708 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 PLEKHO1Q53GL0 409 aaPredicted RBP4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 DCAF6Q58WW2 860 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 WASHC2DQ5SRD0 308 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 FAAH2Q6GMR7 532 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 INO80CQ6PI98 192 aaPredicted RBP4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 PPHLN1Q8NEY8 458 aaKnown RBP4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 GABPB2Q8TAK5 448 aaPredicted RBP4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 SLC35F5Q8WV83 523 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 SLC25A28Q96A46 364 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 RNF183Q96D59 192 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 KIF1BPQ96EK5 621 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 AGXT2Q9BYV1 514 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 ISCUQ9H1K1 167 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 SLC32A1Q9H598 525 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 CXorf56Q9H5V9 222 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 MAP6D1Q9H9H5 199 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 SPATS2LQ9NUQ6 558 aaKnown RBP4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 KIAA1456Q9P272 454 aa4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 PLEKHB1Q9UF11 243 aaPredicted RBP4.01□□□□□ -1.77
LSM1P1-201ENST00000438629 TEX13CA0A0J9YWL9 993 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TYW5A2RUC4 315 aaKnown RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 EBAG9O00559 213 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 MTA2O94776 668 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TMEM63AO94886 807 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 GGT5P36269 586 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 POLD2P49005 469 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 ENTPD1P49961 510 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 CDH12P55289 794 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 MPP1Q00013 466 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TDGQ13569 410 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TAF11Q15544 211 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 HIST2H2ACQ16777 129 aaPredicted RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 PRTGQ2VWP7 1150 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 SERTAD4-AS1Q5TG53 156 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 ASPHD1Q5U4P2 390 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TMEM81Q6P7N7 255 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TMED8Q6PL24 325 aaPredicted RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 CPLX2Q6PUV4 134 aaKnown RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 DSTYKQ6XUX3 929 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 COLCA1Q6ZS62 124 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 FAM160B2Q86V87 743 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 PALB2Q86YC2 1186 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 GPSM1Q86YR5 675 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 RBFAQ8N0V3 343 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TMEM199Q8N511 208 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 TEX45Q8NA69 505 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 ZNF548Q8NEK5 533 aaPredicted RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 MCPH1Q8NEM0 835 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 RASSF8Q8NHQ8 419 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 CEP76Q8TAP6 659 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 HDAC2Q92769 488 aaKnown RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 ATOH1Q92858 354 aaPredicted RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 ZNF778Q96MU6 729 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 FCRL4Q96PJ5 515 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 GFM1Q96RP9 751 aaKnown RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 WDR77Q9BQA1 342 aaPredicted RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 CATSPERBQ9H7T0 1116 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 SIRT3Q9NTG7 399 aaPredicted RBP4□□□□□ -1.77
LSM1P1-201ENST00000438629 TAS2R10Q9NYW0 307 aa4□□□□□ -1.77
LSM1P1-201ENST00000438629 ITIH6Q6UXX5 1313 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 PABPN1LA6NDY0 278 aaKnown RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 MYMKA6NI61 221 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 MBD4O95243 580 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 HSPA1AP0DMV8 641 aaKnown RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 HSPA1BP0DMV9 641 aaKnown RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 ARSBP15848 533 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 CHRNB2P17787 502 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 CD72P21854 359 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 POU1F1P28069 291 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 ABCD1P33897 745 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 GABRB2P47870 512 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 CCT4P50991 539 aaKnown RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 EIF3BP55884 814 aaKnown RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 ZP1P60852 638 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 SLC18A2Q05940 514 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 VEPH1Q14D04 833 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 EPHA10Q5JZY3 1008 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 OTUD1Q5VV17 481 aaPredicted RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 DCAF12L2Q5VW00 463 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 PATL1Q86TB9 770 aaKnown RBP3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 TRIM74Q86UV6 250 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 TRIM73Q86UV7 250 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 NRACQ8N912 160 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 VCPIP1Q96JH7 1222 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 C7orf26Q96N11 449 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 H2AFJQ9BTM1 129 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 CDT1Q9H211 546 aa3.99□□□□□ -1.77
LSM1P1-201ENST00000438629 KLHL31Q9H511 634 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms