RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SMARCA4P51532 1647 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM172BPA6NC97 362 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM90A18PA6NE21 464 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM90A16PA6NEW6 464 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM90A9PA6NNJ1 464 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM90A5PA8MXJ8 464 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 NPIPB11E5RHQ5 1161 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 HEXIM1O94992 359 aaKnown RBP3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM90A15PP0C7V4 464 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FAM90A14PP0C7W9 464 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 DPP6P42658 865 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 NEK3P51956 506 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 ERVK11-1P61568 191 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 BTKQ06187 659 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 OS9Q13438 667 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 BIRC2Q13490 618 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 TRIM60Q495X7 471 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 SYCP2LQ5T4T6 812 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 IZUMO3Q5VZ72 239 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 AADACL2Q6P093 401 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 TMC8Q8IU68 726 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 SCN4BQ8IWT1 228 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 PGBD5Q8N414 524 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 OR2C3Q8N628 320 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 DBF4BQ8NFT6 615 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 LRRC8CQ8TDW0 803 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 C2CD4CQ8TF44 421 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 TBC1D22AQ8WUA7 517 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 FBXO17Q96EF6 278 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 PGLYRP2Q96PD5 576 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 OR1F2PQ96R84 312 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 RPS6KC1Q96S38 1066 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 ELAC2Q9BQ52 826 aaKnown RBP3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 NAA15Q9BXJ9 866 aaKnown RBP3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 SCRT2Q9NQ03 307 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 CHST12Q9NRB3 414 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 TMEM51Q9NW97 253 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 UPB1Q9UBR1 384 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 PAM16Q9Y3D7 125 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 ADAM18Q9Y3Q7 739 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 COMMD10Q9Y6G5 202 aa3.35□□□□□ -1.87
HMGB1P31-201ENST00000437242 WDR62O43379 1518 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 IGHV4OR15-8A0A075B7B6 117 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 EFCAB8A8MWE9 144 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 TIMM23O14925 209 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 SYN3O14994 580 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 PLA2G6O60733 806 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 CRYAAP02489 173 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 APOHP02749 345 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 CFC1BP0CG36 223 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 CFC1P0CG37 223 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 YWHAQP27348 245 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 FMO4P31512 558 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 SKIV2L2P42285 1042 aaKnown RBP3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 GPR12P47775 334 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 ATP12AP54707 1039 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 ADORA2A-AS1P86434 159 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 MORC3Q14149 939 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 LONRF1Q17RB8 773 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 PLEKHA7Q6IQ23 1121 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 KLHL24Q6TFL4 600 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 GALNT7Q86SF2 657 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 SPEM1Q8N4L4 309 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 WDSUB1Q8N9V3 476 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 SLC2A12Q8TD20 617 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 GPT2Q8TD30 523 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 RSC1A1Q92681 617 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 SCMH1Q96GD3 660 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 PIGSQ96S52 555 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 MYD88Q99836 296 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 EGLN1Q9GZT9 426 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 ACAD9Q9H845 621 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 NLRC4Q9NPP4 1024 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 SLC22A11Q9NSA0 550 aa3.34□□□□□ -1.87
HMGB1P31-201ENST00000437242 HMGXB3Q12766 1538 aa3.34□□□□□ -1.88
HMGB1P31-201ENST00000437242 A0A096LPK6 155 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 CHL1O00533 1208 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 EDIL3O43854 480 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 PEX14O75381 377 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 TBX6O95947 436 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 IGHV4-30-4P0DP06 118 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 CYP4B1P13584 511 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 KCNA5P22460 613 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 DCTDP32321 178 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 NLRP5P59047 1200 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 CYP4A11Q02928 519 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 ACCSLQ4AC99 568 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 ATPAF1Q5TC12 328 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 TBC1D9BQ66K14 1250 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 FOXL2NBQ6ZUU3 175 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 TOGARAM2Q6ZUX3 1019 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 FAM186BQ8IYM0 893 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 SCAIQ8N9R8 606 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 DEPTORQ8TB45 409 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 ATOH1Q92858 354 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 KIAA1191Q96A73 305 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 ARRDC3Q96B67 414 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 CCDC138Q96M89 665 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 MPHOSPH6Q99547 160 aaKnown RBP3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 MSTO1Q9BUK6 570 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms