RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 MYL3P08590 195 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 CPA3P15088 417 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 ADRA1BP35368 520 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 PNPLA4P41247 253 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 AFF1P51825 1210 aaKnown RBP12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 PCLAFQ15004 111 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 ANKRD20A4Q4UJ75 823 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 ATG14Q6ZNE5 492 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 TIFABQ6ZNK6 161 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 CCDC106Q9BWC9 280 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 POU2F3Q9UKI9 436 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 ZNF487B1APH4 448 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 BUD23O43709 281 aaKnown RBP12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 ALDH1A2O94788 518 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 TOMM70O94826 608 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 FBXO21O94952 628 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 CARTPTQ16568 116 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 ZNF423Q2M1K9 1284 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 PAN2Q504Q3 1202 aaKnown RBP12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 OTUD1Q5VV17 481 aaPredicted RBP12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 EGFLAMQ63HQ2 1017 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 VPS50Q96JG6 964 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 NPY6RQ99463 290 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 CHRAC1Q9NRG0 131 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 COPG2Q9UBF2 871 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 PACSIN3Q9UKS6 424 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 CITO14578 2027 aa12.4□□□□□ -0.42
SEMA3F-206ENST00000434342 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 KLHL41O60662 606 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 TM7SF2O76062 418 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 HSPA4LO95757 839 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 PROCP04070 461 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 SRGAP2BP0DMP2 458 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 POTEHQ6S545 545 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 RNF111Q6ZNA4 994 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 PRR23CQ6ZRP0 262 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 PAQR9Q6ZVX9 377 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 LPCAT2Q7L5N7 544 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 KDELC2Q7Z4H8 507 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 DHDDSQ86SQ9 333 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 BPHLQ86WA6 291 aaPredicted RBP12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 ICA1LQ8NDH6 482 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 HPS1Q92902 700 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 UNKQ9C0B0 810 aaKnown RBP12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 KLHL25Q9H0H3 589 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 SIK2Q9H0K1 926 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 GDAP2Q9NXN4 497 aa12.4□□□□□ -0.43
SEMA3F-206ENST00000434342 MYBPHLA2RUH7 354 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 DCXO43602 365 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 SIN3BO75182 1162 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 JCHAINP01591 159 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 CDH2P19022 906 aaPredicted RBP12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 MX2P20592 715 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 PTPN3P26045 913 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 ARRB2P32121 409 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 ARL1P40616 181 aaPredicted RBP12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 NKX2-5P52952 324 aaPredicted RBP12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 STEAP4Q687X5 459 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 FSTL4Q6MZW2 842 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 ELMSAN1Q6PJG2 1045 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 RHOBTB2Q9BYZ6 727 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 SOX13Q9UN79 622 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 PTPRFP10586 1907 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 A0A096LPK6 155 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 GOLGA8QA0A0J9YX86 632 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 GOLGA8OA6NCC3 632 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 FAM47E-STBD1D6RA91 191 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 GOLGA8NF8WBI6 632 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 DAB1O75553 588 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 ENO2P09104 434 aaPredicted RBP12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 IRF9Q00978 393 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 MFSD10Q14728 455 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 KCNJ8Q15842 424 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 IQSEC1Q6DN90 963 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 RWDD4Q6NW29 188 aaKnown RBP12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 DCDC5Q6ZRR9 648 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 GPRIN1Q7Z2K8 1008 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 TMC7Q7Z402 723 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 C11orf74Q86VG3 221 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 ACMSDQ8TDX5 336 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 NAT9Q9BTE0 207 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 LRRC40Q9H9A6 602 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 IARS2Q9NSE4 1012 aaKnown RBP12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 SLC39A10Q9ULF5 831 aa12.39□□□□□ -0.43
SEMA3F-206ENST00000434342 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
SEMA3F-206ENST00000434342 TEX28O15482 410 aa12.38□□□□□ -0.43
SEMA3F-206ENST00000434342 MAGEC1O60732 1142 aa12.38□□□□□ -0.43
SEMA3F-206ENST00000434342 CNOT3O75175 753 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms