RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 MRPS22P82650 360 aaKnown RBP11.95□□□□□ -0.5
CD44-209ENST00000433892 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
CD44-209ENST00000433892 UGP2Q16851 508 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 TSTD2Q5T7W7 516 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ZNF280DQ6N043 979 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 BNC2Q6ZN30 1099 aaPredicted RBP11.95□□□□□ -0.5
CD44-209ENST00000433892 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 CPSF7Q8N684 471 aaKnown RBP11.95□□□□□ -0.5
CD44-209ENST00000433892 HASPINQ8TF76 798 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ELMO2Q96JJ3 720 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 GCNAQ96QF7 691 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 SERPINI1Q99574 410 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 FAM192AQ9GZU8 254 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 OSBPL2Q9H1P3 480 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 GLOD4Q9HC38 313 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 VTI1BQ9UEU0 232 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
CD44-209ENST00000433892 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ZNF236Q9UL36 1845 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 NEMP2A6NFY4 417 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 MAFKO60675 156 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ANXA9O76027 345 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 COL6A2P12110 1019 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 DNAJB2P25686 324 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 CHRNA4P43681 627 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 PRKAA2P54646 552 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 TAS2R39P59534 338 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 XIAPP98170 497 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 FLOT2Q14254 428 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ZNF423Q2M1K9 1284 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ZNF470Q6ECI4 717 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 FBXL19Q6PCT2 694 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 CNTN4Q8IWV2 1026 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 KLHDC8BQ8IXV7 354 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 PQLC1Q8N2U9 271 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ICA1LQ8NDH6 482 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 PPHLN1Q8NEY8 458 aaKnown RBP11.95□□□□□ -0.5
CD44-209ENST00000433892 IRGQQ8WZA9 623 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 FCRL5Q96RD9 977 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 TMEM209Q96SK2 561 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 SLC39A8Q9C0K1 460 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 TRPV6Q9H1D0 765 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 ZNF385DQ9H6B1 395 aa11.95□□□□□ -0.5
CD44-209ENST00000433892 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
CD44-209ENST00000433892 SLCO1B7G3V0H7 640 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 AURKAO14965 403 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 MSI1O43347 362 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 B3GAT3O94766 335 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 DPP6P42658 865 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 BRCC3P46736 316 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 PGFP49763 221 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 HK2P52789 917 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 MS4A2Q01362 244 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 FOLH1Q04609 750 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 ZNF33AQ06730 810 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 CEACAM7Q14002 265 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 SEPT6Q14141 434 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 PDK3Q15120 406 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 UPP1Q16831 310 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 EML3Q32P44 896 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 PIGGQ5H8A4 983 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 NOMO2Q5JPE7 1267 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 SH2D4BQ5SQS7 431 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 AGMOQ6ZNB7 445 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 LCA5Q86VQ0 697 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 ST13P4Q8IZP2 240 aaPredicted RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 PNPLA1Q8N8W4 532 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 KDM1BQ8NB78 822 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 TXNDC5Q8NBS9 432 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 HEXDCQ8WVB3 486 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 IL12RB2Q99665 862 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 FSD1LQ9BXM9 530 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 MRPL46Q9H2W6 279 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 ZBTB26Q9HCK0 441 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 CHST12Q9NRB3 414 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 SFMBT1Q9UHJ3 866 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 NUDT5Q9UKK9 219 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 PSMD13Q9UNM6 376 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 FIS1Q9Y3D6 152 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 TCAF1Q9Y4C2 921 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 DTNAQ9Y4J8 743 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 COPG1Q9Y678 874 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 MATN3O15232 486 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 PEX1O43933 1283 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 PAGE1O75459 146 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 POMCP01189 267 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 HLA-DQB2P05538 268 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 HNRNPLP14866 589 aaKnown RBP eCLIP11.94□□□□□ -0.5
CD44-209ENST00000433892 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 PURAQ00577 322 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 ROR2Q01974 943 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 ART3Q13508 389 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 FSCN1Q16658 493 aaKnown RBP11.94□□□□□ -0.5
CD44-209ENST00000433892 LIN52Q52LA3 116 aa11.94□□□□□ -0.5
CD44-209ENST00000433892 MORN1Q5T089 497 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms