RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 CHST9Q7L1S5 443 aa15.35■□□□□ 0.05
SF1-209ENST00000433274 CCDC117Q8IWD4 279 aaPredicted RBP15.35■□□□□ 0.05
SF1-209ENST00000433274 MRPS31Q92665 395 aaKnown RBP15.35■□□□□ 0.05
SF1-209ENST00000433274 RBBP8Q99708 897 aa15.35■□□□□ 0.05
SF1-209ENST00000433274 VPS11Q9H270 941 aa15.35■□□□□ 0.05
SF1-209ENST00000433274 ATP13A1Q9HD20 1204 aa15.35■□□□□ 0.05
SF1-209ENST00000433274 PLLPQ9Y342 182 aa15.35■□□□□ 0.05
SF1-209ENST00000433274 ILVBLA1L0T0 632 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 CBX4O00257 560 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 TBL1XO60907 577 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 CKMP06732 381 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 GJA1P17302 382 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 RNF187Q5TA31 235 aaPredicted RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 PDPK2PQ6A1A2 396 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 SPATA21Q7Z572 469 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 TMC8Q8IU68 726 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 ARMC2Q8NEN0 867 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 ATP2A3Q93084 1043 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 ZNF599Q96NL3 588 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 EMILIN2Q9BXX0 1053 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 MUC3BQ9H195 1237 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 MKS1Q9NXB0 559 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 PHTF1Q9UMS5 762 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 RRP15Q9Y3B9 282 aaKnown RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 PLXNA4Q9HCM2 1894 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 KDELR3O43731 214 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 KIAA0754O94854 1291 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 VAPBO95292 243 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 OLFM2O95897 454 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 C1RP00736 705 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 NEFHP12036 1026 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 SPRP35270 261 aaPredicted RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 SERPINB4P48594 390 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 SERPINH1P50454 418 aaKnown RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 RNF219Q5W0B1 726 aaPredicted RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 SRLQ86TD4 932 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 SETD3Q86TU7 594 aaPredicted RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 CARNMT1Q8N4J0 409 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 SLC22A17Q8WUG5 538 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 BHMTQ93088 406 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 ARNT2Q9HBZ2 717 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 UBA2Q9UBT2 640 aaPredicted RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 STOML2Q9UJZ1 356 aa15.34■□□□□ 0.05
SF1-209ENST00000433274 USP15Q9Y4E8 981 aaPredicted RBP15.34■□□□□ 0.05
SF1-209ENST00000433274 A0A1W2PRU2 124 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 NRG2O14511 850 aaPredicted RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 CCL16O15467 120 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 GREM1O60565 184 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 GLUD1P00367 558 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 MYL4P12829 197 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 TYK2P29597 1187 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 CRHR1P34998 444 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 BMPR1AP36894 532 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 LIMK2P53671 638 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 PDE1CQ14123 709 aaPredicted RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 CNGA3Q16281 694 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 STXBP5Q5T5C0 1151 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 FSTL4Q6MZW2 842 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 CXorf57Q6NSI4 855 aaKnown RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 ELMOD1Q8N336 334 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 BBS5Q8N3I7 341 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 DCLK2Q8N568 766 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 PTCD2Q8WV60 388 aaKnown RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 PTPRN2Q92932 1015 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 TADA1Q96BN2 335 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 THOC1Q96FV9 657 aaKnown RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 CORO1BQ9BR76 489 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 CINPQ9BW66 212 aaPredicted RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 LRRC3Q9BY71 257 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 MANSC1Q9H8J5 431 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 TBC1D30Q9Y2I9 924 aa15.33■□□□□ 0.05
SF1-209ENST00000433274 MTO1Q9Y2Z2 717 aaKnown RBP15.33■□□□□ 0.05
SF1-209ENST00000433274 E2F8A0AVK6 867 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 H0Y626 953 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 DNAJB1P25685 340 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 ITIH4Q14624 930 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 PPM1JQ5JR12 505 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 SIRPB2Q5JXA9 342 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 CMC1Q7Z7K0 106 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 CCDC63Q8NA47 563 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 ACMSDQ8TDX5 336 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 POF1BQ8WVV4 589 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 IFT43Q96FT9 208 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 MECRQ9BV79 373 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 MRM3Q9HC36 420 aaKnown RBP15.33■□□□□ 0.04
SF1-209ENST00000433274 SEPT3Q9UH03 358 aa15.33■□□□□ 0.04
SF1-209ENST00000433274 HEATR9A2RTY3 570 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 C2orf71A6NGG8 1288 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
SF1-209ENST00000433274 LATS1O95835 1130 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 ARNTP27540 789 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 FSCBQ5H9T9 825 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 Q6ZNB5 142 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 SPRED2Q7Z698 418 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 TMA16Q96EY4 203 aaKnown RBP15.32■□□□□ 0.04
SF1-209ENST00000433274 EXOC2Q96KP1 924 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 SNX15Q9NRS6 342 aa15.32■□□□□ 0.04
SF1-209ENST00000433274 TREX1Q9NSU2 369 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms