RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PRNPP04156 253 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 CTAGE8P0CG41 777 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 WASP42768 502 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 CSNK1DP48730 415 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 CCR3P51677 355 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 DGKEP52429 567 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 GDF10P55107 478 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 C2orf54Q08AI8 447 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 NSUN2Q08J23 767 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHD4-202ENST00000430771 WASHC5Q12768 1159 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 FZD5Q13467 585 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 CAMK2GQ13555 558 aaPredicted RBP11.16□□□□□ -0.62
CHD4-202ENST00000430771 DHX34Q14147 1143 aaKnown RBP11.16□□□□□ -0.62
CHD4-202ENST00000430771 SLC14A2Q15849 920 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ANKRD20A2Q5SQ80 823 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ANKRD20A1Q5TYW2 823 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ANKRD20A3Q5VUR7 823 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ZNF776Q68DI1 518 aaPredicted RBP11.16□□□□□ -0.62
CHD4-202ENST00000430771 C4orf22Q6V702 233 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 B4GALNT4Q76KP1 1039 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 CTAGE6Q86UF2 777 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 CTAGE4Q8IX94 777 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 SPEM1Q8N4L4 309 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 FAM71DQ8N9W8 422 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 TSEN2Q8NCE0 465 aaKnown RBP11.16□□□□□ -0.62
CHD4-202ENST00000430771 SPATA4Q8NEY3 305 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 OR2T3Q8NH03 318 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 PTPRN2Q92932 1015 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 LRRC45Q96CN5 670 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 PPP1R16AQ96I34 528 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 AGAP3Q96P47 875 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 NUDCD1Q96RS6 583 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 TUBGCP5Q96RT8 1024 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 HEPHQ9BQS7 1158 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 OSBPL1AQ9BXW6 950 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ZDHHC6Q9H6R6 413 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 PCDH9Q9HC56 1237 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 PAK5Q9P286 719 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 HECAQ9UBI9 543 aaPredicted RBP11.16□□□□□ -0.62
CHD4-202ENST00000430771 IL36AQ9UHA7 158 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 ATP8A1Q9Y2Q0 1164 aa11.16□□□□□ -0.62
CHD4-202ENST00000430771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 TCRBV21S2A2A0A5A6 115 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 WASH3PC4AMC7 463 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 MUSKO15146 869 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 INSIG1O15503 277 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 SOCS5O75159 536 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 ZNF821O75541 412 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 GCATO75600 419 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 POP4O95707 220 aaKnown RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 DCNP07585 359 aaKnown RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 SERPINF2P08697 491 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 NFKB1P19838 968 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 CR2P20023 1033 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 SERPINA4P29622 427 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 KCNJ1P48048 391 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 SCNN1BP51168 640 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 MAXP61244 160 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PRPSAP1Q14558 356 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PPP1R7Q15435 360 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 CRY1Q16526 586 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 TTC31Q49AM3 519 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 CFAP58Q5T655 872 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 ATXN7L2Q5T6C5 722 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 C9orf64Q5T6V5 341 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 FAM46CQ5VWP2 391 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 TTC27Q6P3X3 843 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PKN3Q6P5Z2 889 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 DPY19L3Q6ZPD9 716 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 SYDE1Q6ZW31 735 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 PID1Q7Z2X4 250 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 BMP8AQ7Z5Y6 402 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 SRLQ86TD4 932 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 KLHL7Q8IXQ5 586 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PGBD5Q8N414 524 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PAF1Q8N7H5 531 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 OR2A12Q8NGT7 310 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 CCDC110Q8TBZ0 833 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 GRIN3AQ8TCU5 1115 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 SLCO2A1Q92959 643 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 ZNF419Q96HQ0 510 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 SEMA3CQ99985 751 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
CHD4-202ENST00000430771 SLC25A51Q9H1U9 297 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 ATP13A3Q9H7F0 1226 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 USP29Q9HBJ7 922 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 GLOD4Q9HC38 313 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PRSS16Q9NQE7 514 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 VPS45Q9NRW7 570 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.62
CHD4-202ENST00000430771 ATG2BQ96BY7 2078 aa11.15□□□□□ -0.63
CHD4-202ENST00000430771 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.63
CHD4-202ENST00000430771 A0A1W2PQ67 120 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 A0A1W2PQF6 199 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms