RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CDO1Q16878 200 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 NLRP14Q86W24 1093 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 OR2AP1Q8NGE2 309 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 ARHGEF2Q92974 986 aaKnown RBP15.15■□□□□ 0.02
MSH5-208ENST00000429846 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 BMFQ96LC9 184 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 APOLD1Q96LR9 279 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 BBC3Q96PG8 261 aaPredicted RBP15.15■□□□□ 0.02
MSH5-208ENST00000429846 C1QTNF2Q9BXJ5 285 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 OSBPL1AQ9BXW6 950 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 TM6SF2Q9BZW4 377 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 HECAQ9UBI9 543 aaPredicted RBP15.15■□□□□ 0.02
MSH5-208ENST00000429846 NEU3Q9UQ49 428 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 CSNK1G3Q9Y6M4 447 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 ASXL3Q9C0F0 2248 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 SHROOM3Q8TF72 1996 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 FAM170AA1A519 330 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 POM121BA6NF01 834 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 ZSCAN5CA6NGD5 496 aaPredicted RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 C2CD4BA6NLJ0 364 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 FPGTO14772 594 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 RAMP2O60895 175 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 GFPT2O94808 682 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 PAK4O96013 591 aaPredicted RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 SOX5P35711 763 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 SGCGQ13326 291 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 FGL2Q14314 439 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 FZD2Q14332 565 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 C15orf59Q2T9L4 293 aaPredicted RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 TBC1D25Q3MII6 688 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 CCDC14Q49A88 953 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 ZNF805Q5CZA5 627 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 FKBP15Q5T1M5 1219 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 CDCP2Q5VXM1 449 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 RWDD4Q6NW29 188 aaKnown RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 ZCCHC8Q6NZY4 707 aaKnown RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 KDM7AQ6ZMT4 941 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 ZNF548Q8NEK5 533 aaPredicted RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 SLC20A1Q8WUM9 679 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 RXFP2Q8WXD0 754 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 CENPIQ92674 756 aaPredicted RBP15.14■□□□□ 0.01
MSH5-208ENST00000429846 NTAN1Q96AB6 310 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 CRELD1Q96HD1 420 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 DEPDC7Q96QD5 511 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 C11orf70Q9BRQ4 267 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 TAB2Q9NYJ8 693 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 LOC400499M0QZD8 3231 aa15.14■□□□□ 0.01
MSH5-208ENST00000429846 C16orf96A6NNT2 1141 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 K7ESM1 405 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 NEMP1O14524 444 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 LZTS3O60299 673 aaPredicted RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 OPA1O60313 960 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 LRIG2O94898 1065 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 POP4O95707 220 aaKnown RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 ITPKBP27987 946 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 ACVRL1P37023 503 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 NSFP46459 744 aaKnown RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 JAM2P57087 298 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 POLR2FP61218 127 aaKnown RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 PDE1CQ14123 709 aaPredicted RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 CDKAL1Q5VV42 579 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 LSMEM2Q8N112 164 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 RYBPQ8N488 228 aaPredicted RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 CASKIN2Q8WXE0 1202 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 KLF6Q99612 283 aaPredicted RBP15.13■□□□□ 0.01
MSH5-208ENST00000429846 PRORYQ9H606 182 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 NDFIP2Q9NV92 336 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 DNAI1Q9UI46 699 aa15.13■□□□□ 0.01
MSH5-208ENST00000429846 LY6G6EA0A0G2JKS1 128 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 TK2O00142 265 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 TOR1BO14657 336 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 RAD51BO15315 384 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 DXOO77932 396 aaKnown RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 CALB1P05937 261 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 PLEKP08567 350 aaPredicted RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 KRT3P12035 628 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 UNGP13051 313 aaPredicted RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 STAT1P42224 750 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 ABL2P42684 1182 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 HDAC4P56524 1084 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 PFN3P60673 137 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 RAD51Q06609 339 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 PTK2BQ14289 1009 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 KRT31Q15323 416 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 RAB6CQ53S08 254 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 LSM14AQ8ND56 463 aaKnown RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 OR6K2Q8NGY2 324 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 JOSD2Q8TAC2 188 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 SLC30A5Q8TAD4 765 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 GPT2Q8TD30 523 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 FAM172AQ8WUF8 416 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 BTN2A2Q8WVV5 523 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 TBATAQ96M53 351 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 GDAP1L1Q96MZ0 367 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 ZNF578Q96N58 590 aaPredicted RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 C1QTNF7Q9BXJ2 289 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 RAB6CQ9H0N0 254 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 ABCG4Q9H172 646 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms