RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 C3orf38Q5JPI3 329 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 OTUD1Q5VV17 481 aaPredicted RBP13.35□□□□□ -0.27
HLA-F-219ENST00000429294 RBM44Q6ZP01 1051 aaKnown RBP13.35□□□□□ -0.27
HLA-F-219ENST00000429294 EFL1Q7Z2Z2 1120 aaKnown RBP13.35□□□□□ -0.27
HLA-F-219ENST00000429294 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 ZNF683Q8IZ20 524 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 WDR48Q8TAF3 677 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 LENG8Q96PV6 779 aaPredicted RBP13.35□□□□□ -0.27
HLA-F-219ENST00000429294 ZDHHC6Q9H6R6 413 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 SPASTQ9UBP0 616 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 HPCAL4Q9UM19 191 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 SPTA1P02549 2419 aa13.35□□□□□ -0.27
HLA-F-219ENST00000429294 CXorf51AA0A1B0GTR3 108 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 IGLON5A6NGN9 336 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 J3QKU1 62 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 TCEA3O75764 348 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 TFE3P19532 575 aaPredicted RBP13.34□□□□□ -0.27
HLA-F-219ENST00000429294 GABRB2P47870 512 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 VAC14Q08AM6 782 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 ARL13BQ3SXY8 428 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 IGF2-ASQ6U949 168 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 FAM71AQ8IYT1 594 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 ARL14Q8N4G2 192 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 ASB12Q8WXK4 309 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 NAT6Q93015 286 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 ISG20Q96AZ6 181 aaKnown RBP13.34□□□□□ -0.27
HLA-F-219ENST00000429294 VCPIP1Q96JH7 1222 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 C1QTNF2Q9BXJ5 285 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 CPNE5Q9HCH3 593 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 GPR27Q9NS67 375 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 PPARGC1AQ9UBK2 798 aaKnown RBP13.34□□□□□ -0.27
HLA-F-219ENST00000429294 SATB2Q9UPW6 733 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 FCF1Q9Y324 198 aaKnown RBP13.34□□□□□ -0.27
HLA-F-219ENST00000429294 RP1P56715 2156 aa13.34□□□□□ -0.27
HLA-F-219ENST00000429294 TENM4Q6N022 2769 aa13.33□□□□□ -0.27
HLA-F-219ENST00000429294 AHCTF1Q8WYP5 2266 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 DOCK4Q8N1I0 1966 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 LY6G6EA0A0G2JKS1 128 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 EME2A4GXA9 379 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 C16orf96A6NNT2 1141 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 GOLGA8SH3BPF8 625 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 I6L893 689 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 RAD51BO15315 384 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ZNF821O75541 412 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ANXA6P08133 673 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 CYP11B1P15538 503 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 TGM2P21980 687 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 CDH5P33151 784 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 SNRPD1P62314 119 aaKnown RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 RAD51Q06609 339 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 FGL2Q14314 439 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 MAN2A1Q16706 1144 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 DEFB133Q30KQ1 61 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ZNF805Q5CZA5 627 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ESRP1Q6NXG1 681 aaKnown RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 GUSBP11Q6P575 273 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 FOXR1Q6PIV2 292 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 PARS2Q7L3T8 475 aaKnown RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 FAM131BQ86XD5 332 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 XYLT1Q86Y38 959 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 WDR36Q8NI36 951 aaKnown RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 SCG3Q8WXD2 468 aaKnown RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ATXN7L3BQ96GX2 97 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 SLC46A1Q96NT5 459 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 OSBPL1AQ9BXW6 950 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 SLC13A1Q9BZW2 595 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 TM6SF2Q9BZW4 377 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 ASCL3Q9NQ33 180 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 APOBEC3BQ9UH17 382 aaKnown RBP13.33□□□□□ -0.28
HLA-F-219ENST00000429294 PCDHGA8Q9Y5G5 932 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 U3KQA8 63 aa13.33□□□□□ -0.28
HLA-F-219ENST00000429294 RNF103O00237 685 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 KRIT1O00522 736 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
HLA-F-219ENST00000429294 MUSKO15146 869 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 POP4O95707 220 aaKnown RBP13.32□□□□□ -0.28
HLA-F-219ENST00000429294 LSM8O95777 96 aaKnown RBP13.32□□□□□ -0.28
HLA-F-219ENST00000429294 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
HLA-F-219ENST00000429294 FLT3P36888 993 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 MLLT3P42568 568 aaPredicted RBP13.32□□□□□ -0.28
HLA-F-219ENST00000429294 MAPKAPK2P49137 400 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 ARF5P84085 180 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 SPIDRQ14159 915 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
HLA-F-219ENST00000429294 PRRT3Q5FWE3 981 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
HLA-F-219ENST00000429294 RWDD4Q6NW29 188 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms