RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TAZQ16635 292 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 CFAP58Q5T655 872 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 SEL1L2Q5TEA6 688 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 ARMCX6Q7L4S7 300 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 CCDC13Q8IYE1 715 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 TMEFF1Q8IYR6 380 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 TOE1Q96GM8 510 aaKnown RBP14.78□□□□□ -0.04
SGCE-204ENST00000428696 ZNF599Q96NL3 588 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 NEUROG2Q9H2A3 272 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 PABPC3Q9H361 631 aaKnown RBP14.78□□□□□ -0.04
SGCE-204ENST00000428696 PPM1HQ9ULR3 514 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 NUP205Q92621 2012 aa14.78□□□□□ -0.04
SGCE-204ENST00000428696 GOLGA6L9A6NEM1 432 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 MATN3O15232 486 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 GSRP00390 522 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 UGT2B4P06133 528 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 CTSLP07711 333 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 BCKDHBP21953 392 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 MSNP26038 577 aaKnown RBP14.77□□□□□ -0.04
SGCE-204ENST00000428696 CD6P30203 668 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 P2RY2P41231 377 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 MAXP61244 160 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 ELF2Q15723 593 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 PPP2R5EQ16537 467 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 MAP7D1Q3KQU3 841 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 GDPD4Q6W3E5 623 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 LPCAT2Q7L5N7 544 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 SRLQ86TD4 932 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 KBTBD6Q86V97 674 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 OR14C36Q8NHC7 312 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 NELL1Q92832 810 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 HERPUD2Q9BSE4 406 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 GPR174Q9BXC1 333 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 CEP41Q9BYV8 373 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 LHX3Q9UBR4 397 aa14.77□□□□□ -0.04
SGCE-204ENST00000428696 IGHV1OR15-9A0A0B4J2B8 117 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 CXorf51AA0A1B0GTR3 108 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 ALOX15BO15296 676 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 GJB3O75712 270 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 OXTRP30559 389 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 RGRP47804 291 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 DHPSP49366 369 aaPredicted RBP14.76□□□□□ -0.05
SGCE-204ENST00000428696 GNG11P61952 73 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 FBXL19Q6PCT2 694 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 SLC36A4Q6YBV0 504 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 BBS12Q6ZW61 710 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 SLC35F6Q8N357 371 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 C17orf53Q8N3J3 647 aaPredicted RBP14.76□□□□□ -0.05
SGCE-204ENST00000428696 AADATQ8N5Z0 425 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 TMIEQ8NEW7 156 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 PDCD6IPQ8WUM4 868 aaKnown RBP14.76□□□□□ -0.05
SGCE-204ENST00000428696 TFB1MQ8WVM0 346 aaKnown RBP14.76□□□□□ -0.05
SGCE-204ENST00000428696 TRIM44Q96DX7 344 aaPredicted RBP14.76□□□□□ -0.05
SGCE-204ENST00000428696 KLHL32Q96NJ5 620 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 AGAP3Q96P47 875 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 TSGA13Q96PP4 275 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 HINFPQ9BQA5 517 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 BTBD1Q9H0C5 482 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 C10orf88Q9H8K7 445 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 HAUS2Q9NVX0 235 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 SERGEFQ9UGK8 458 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 MBD1Q9UIS9 605 aaPredicted RBP14.76□□□□□ -0.05
SGCE-204ENST00000428696 SCML1Q9UN30 329 aa14.76□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3DA0A087WVF3 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3IA0A087WXS9 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3EA0A087X179 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3KA0A087X1G2 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3FA6NER0 549 aaPredicted RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3LB9A6J9 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 RNF103O00237 685 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 MUSKO15146 869 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 CEP104O60308 925 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 RHOBTB1O94844 696 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PIGNO95427 931 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3HP0C7X1 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 XPAP23025 273 aaPredicted RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 ACSL1P33121 698 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 EIF3EP60228 445 aaKnown RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 OTUD4Q01804 1114 aaKnown RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 NHLH1Q02575 133 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 CNTN1Q12860 1018 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 HNRNPDQ14103 355 aaKnown RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 DCAF12L1Q5VU92 463 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3GQ6DHY5 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3CQ6IPX1 549 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 DARS2Q6PI48 645 aaKnown RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 TTC7BQ86TV6 843 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 CAMK1DQ8IU85 385 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PLPP6Q8IY26 295 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TBC1D3Q8IZP1 549 aaPredicted RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 ACTL9Q8TC94 416 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 SNX19Q92543 992 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 HDAC11Q96DB2 347 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PPP1R16AQ96I34 528 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PSKH2Q96QS6 385 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PHOX2BQ99453 314 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 USP36Q9P275 1121 aaKnown RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 JRKLQ9Y4A0 524 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 WASF2Q9Y6W5 498 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms