RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 PDFQ9HBH1 243 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 DYRK4Q9NR20 520 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 HAUS2Q9NVX0 235 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 KCTD5Q9NXV2 234 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 ANAPC7Q9UJX3 599 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 A0A1W2PP55 124 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 TMCO5BA8MYB1 307 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RASA4BC9J798 803 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 PRAMEF26H0Y7S4 382 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 EEF2KO00418 725 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RASA4O43374 803 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 OPHN1O60890 802 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RNASEH2AO75792 299 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 GJB6O95452 261 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 IGSF6O95976 241 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 CDK4P11802 303 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ERCC2P18074 760 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 NFKBIAP25963 317 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 CDC25BP30305 580 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 GGCXP38435 758 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RXRGP48443 463 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ARSEP51690 589 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 CCNHP51946 323 aaPredicted RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 SHC2P98077 582 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 SF3A2Q15428 464 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF423Q2M1K9 1284 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ACCSLQ4AC99 568 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RAB6CQ53S08 254 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF805Q5CZA5 627 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 PIP5KL1Q5T9C9 394 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 NAPEPLDQ6IQ20 393 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 BRAT1Q6PJG6 821 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 PRPF39Q86UA1 669 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 DNAAF5Q86Y56 855 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RGL4Q8IZJ4 473 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 TXLNBQ8N3L3 684 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 HDDC3Q8N4P3 179 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 FRMD1Q8N878 549 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF366Q8N895 744 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF564Q8TBZ8 553 aaPredicted RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 CPLX3Q8WVH0 158 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 VOPP1Q96AW1 172 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 LENG8Q96PV6 779 aaPredicted RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 PEBP4Q96S96 227 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 TRIM5Q9C035 493 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 RAB6CQ9H0N0 254 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 SLC6A17Q9H1V8 727 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 SLC32A1Q9H598 525 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 TMPRSS4Q9NRS4 437 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 CWC15Q9P013 229 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 IMPACTQ9P2X3 320 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 HS3ST3A1Q9Y663 406 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 LAMA1P25391 3075 aa9.29□□□□□ -0.92
SMC1A-203ENST00000428014 TPRP12270 2363 aaKnown RBP9.29□□□□□ -0.92
SMC1A-203ENST00000428014 DNAH14Q0VDD8 3507 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 A0A1W2PR77 199 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 BTNL10A8MVZ5 291 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 BHMG1C9JSJ3 638 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 AREL1O15033 823 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 FLRT2O43155 660 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 SMAD6O43541 496 aaKnown RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 CREB3O43889 395 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF189O75820 626 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TRIM16O95361 564 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 CTSLP07711 333 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 RARAP10276 462 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 MX2P20592 715 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 ACVRL1P37023 503 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 CTSKP43235 329 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 PSMD8P48556 350 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 ATXN3P54252 364 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 CDH6P55285 790 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 AP1S1P61966 158 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 RPS21P63220 83 aaKnown RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 ELP6Q0PNE2 266 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 CNTN1Q12860 1018 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 PAFAH1B3Q15102 231 aaKnown RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 MYLK3Q32MK0 819 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 INAVAQ3KP66 663 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 ALG1LQ6GMV1 187 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 NCEH1Q6PIU2 408 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TMCO3Q6UWJ1 677 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 HORMAD1Q86X24 394 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TMTC1Q8IUR5 882 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 ARHGAP12Q8IWW6 846 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 PYROXD2Q8N2H3 581 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 BBS5Q8N3I7 341 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TC2NQ8N9U0 490 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TMEM145Q8NBT3 493 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 OR14C36Q8NHC7 312 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms